Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0891 ATGAAACTAGATTACTATGGAGAAGTCAACTGCTGTGATGATACCTTGGAGAAAATGATGAAACTTAGAGTTCTCATTGTTCACAATGCAAGCTTCTCCTCAAAGGGTATTCGTCTTCCCAATACATTAAGACTTGTTGATTGGAAAGGGTACCCTTCAACATCTTTTCCACCAGCAGGATTTAATCCCAGTAAAATTGCTGCCTTCAATTTAACTTGTAGTTCTCTTGTATTAAAGAAGCCATTTCAGAAATTTGATCAATTGACTTACATGAACTTCTCCTATTGCCAGTCCATCACTCAATTTCCTAGTGTGTTTGGATCCCCAAATTTAAGAGATTTGGTACTTGACGGATGCAAGCAATTAGTTAAGATTCATAATTCAGTTGGATTTCTCTCTAAACTTGTTTATTTGAGTGCTTCAGACTGCACTCAACTAAGGAGTTTTCTACCAGAAATCTTTCTACCATCTCTTGAATATCTTTCTTTTGACTCGTGTAAAAGACTAACACATTTGCCAAGGGTGAGAGAAAACATGGATAAACTATTAAAGATTTCTGTAATACATACTGCTATTAGAGAGCTTCCGCTATCTTTTGCTAGCAGTCTTTGTGGGCTCGAATATTTAGACATGACAAATTGTAAGCAACTACAATGTGTATTTACAGGATGGTTTCCAAAGCTTCGAACATTGAAGATTGGAGGGTGTTCTCAACTTCGGAAATCATTAAATGTAGATACATTTTTTCTTCTAGAATATCGTTTGATGAGTTTGCATCTTAGCAATGCAAGTCTATCAGATGATGACCTTGAGAAAATTATGCAGATGTTTCCCTATTTAAAAGACTTAATTGTGTCCTCAAACTGCTTTGAGAAAATCCCGTTTAAACACTCCTTTTTCTGGACAAGTCTTGATGTTAGTTACTGTCTAAGCCTTAAATATGTTTTAGCACTTCCTTCTAGCATTCAAAAAGTAGATGCAAGACACTGCAATTCCTTAAGGACATACTCATCATCCACGCTATGGTCACAGGTTTTTTACTTTTAA 1047 0.3572 MKLDYYGEVNCCDDTLEKMMKLRVLIVHNASFSSKGIRLPNTLRLVDWKGYPSTSFPPAGFNPSKIAAFNLTCSSLVLKKPFQKFDQLTYMNFSYCQSITQFPSVFGSPNLRDLVLDGCKQLVKIHNSVGFLSKLVYLSASDCTQLRSFLPEIFLPSLEYLSFDSCKRLTHLPRVRENMDKLLKISVIHTAIRELPLSFASSLCGLEYLDMTNCKQLQCVFTGWFPKLRTLKIGGCSQLRKSLNVDTFFLLEYRLMSLHLSNASLSDDDLEKIMQMFPYLKDLIVSSNCFEKIPFKHSFFWTSLDVSYCLSLKYVLALPSSIQKVDARHCNSLRTYSSSTLWSQVFYF* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0891 348 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 340 IPR044974 GO:0006952
Amo13g0891 348 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 340 - -
Amo13g0891 348 SUPERFAMILY L domain-like 10 338 - -
Amo13g0891 348 Gene3D Ribonuclease Inhibitor 180 343 IPR032675 -
Amo13g0891 348 Gene3D Ribonuclease Inhibitor 8 179 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0891 Amo-Chr13 11008797 11009971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0891 14 241 WRKY Transcription Factor Family AT4G12020 30.769 7.44e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0891 - - ahf:112771910 683.715