Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0883 ATGGGAAGAATGGAACAAATATGGAGAGAAGATTGCTTGGAGTTTAAGCTAGAAAGGTGGATTTCTGACAAGGGAAGCATCATACACATACCATCTTACAAGTTCATAGCTTTCAATACAGGCCCAAGAAGTTGTTTGGGTAAAAATATAACCTTTATTCAGATGAAGATTATCGCCATTGCTTTGCTCTGCAATTTTCAGTTTGAGGTGGTGGAAGGGCATAATAATGTGTGTCCATGTGTTTCTATTATTCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGGTATCAAGGAAATATAA 312 0.3686 MGRMEQIWREDCLEFKLERWISDKGSIIHIPSYKFIAFNTGPRSCLGKNITFIQMKIIAIALLCNFQFEVVEGHNNVCPCVSIILHMKHGLKVKVTKRGIKEI* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0883 103 SUPERFAMILY Cytochrome P450 1 98 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0883 103 Pfam Cytochrome P450 1 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0883 103 Gene3D Cytochrome P450 1 102 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0883 103 PANTHER CYTOCHROME P450 1 97 - -
Amo13g0883 103 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 97 - -
Amo13g0883 103 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 38 47 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0883 Amo-Chr13 10919477 10920508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0883 1 98 Cytochrome P450 AT2G23180 58.163 3.90e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0883 - - ahf:112735737 161.77