Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0879 ATGGACTCCTTAGAGCTTATTGCTATTCTTGCAGCCATTGTCTCATTCTTCTTTATCCACACATGGAGGTCTAATAGAAATAACCGCCTCACTAATTGGCCCTTCTTTGGTATGCTTCCAGGGACTTTATGTAATCTTTCCAATATCCATGATCACACAACMACCAATTTGAAGCAATGTGGAGGTACTTTTTTGTTCAAAGGTCCCTGGTTCACAAACCACAACTTTCTCATCACCAGTGATCCTATGAATGTGCACCACATTACTAGCAAGAACTTTGACAACTACATCAAAGGCTCTGAGTTCTATGAGATTTTTGAAATACTCGGAGATGGCATCTTTAACACTGATTCCCACAAATGGAAGCATAGTAGGAACATACTACATTCATTGTTCAGACAAAACTCGTTTGAGAGTCTAGTTGTGAAAACCATTCATAAGAAGCTCCACAGTTGCCTAGTTCCACTTCTCAATGATGTATCAGAATCAGGAACTGTTGTGGATTTGCAAGACATCTTTCAGAGAATCAGTTTTGACAACATCTGCTCCATAGTGTTGGGGTTTGATCCTAAATCCCTTCCTAACAAGCTCATCGAGTTCCCGGAAGTTGCTTTCGAGAAAGCTTTCAACATGATCGAGGATGTAATGTTTTACAGACACATTGTCCCAAGATTTGTGTGGAAGCTTCAGAAATGGCTCCAAATTGGACGAGGGAAGACCTATACTGAATGTGAAAAAATAATTGACCAATTCTTGCATCAGTGTATATCATCCACATTCCAAGAGAAAAGCAAAGTCAATTGCACCAAAGATGATGATGAACCAACATTTAACATGCTCAAAGCTTTTGTGGAGGAAAGTGGAATGGAACAAATAGATCGCAAGTTTCTAAGAGACAATGCATTGACTCTGTTAGCAGCTGGAAGGGATACAATTAGTTCAAGTCTCAGTTGGTTTTTCTGGCTAGTTTCAACCCATCCTCTTGTTGAAGCCAAGATCCTTGAAGAAATGAGAGCAAACTTTATAACCAAAGAAGAATATTGGCTCATCACTTCAAGATTAGAAAATCTTAACAAGCTAGTTTACCTGCATGGAGCTTTGTGTGAGGCATTGAGACTTTTTCCTGCAGTTCCTTTTGAGCACAAATGTGCAGTTAAATCTGATGTACTCCCTAGTGGACATCGTGTTAATGCAAATACTATTGTAATTTACTCTCCATATTCAATGGGAAGAATGGAACAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAAAGGTGGATTTCTGAAAAGGGAAGCATCATACACATACCATCTTACAAGTTCATAGCTTTCAATGCAGGCCCAAGAAGTTGTTTGGGTAAAAATATAACCTTTATTCAGATGAAGATTGTCGCCATTGCTTTGCTCTGCAATTTTCAGTTTGAGGTGGTGGAAGGGCATAATAATGTGTGTCCATGTGTTTCTATTATTCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGGTATTAATTAG 1530 0.3882 MDSLELIAILAAIVSFFFIHTWRSNRNNRLTNWPFFGMLPGTLCNLSNIHDHTTTNLKQCGGTFLFKGPWFTNHNFLITSDPMNVHHITSKNFDNYIKGSEFYEIFEILGDGIFNTDSHKWKHSRNILHSLFRQNSFESLVVKTIHKKLHSCLVPLLNDVSESGTVVDLQDIFQRISFDNICSIVLGFDPKSLPNKLIEFPEVAFEKAFNMIEDVMFYRHIVPRFVWKLQKWLQIGRGKTYTECEKIIDQFLHQCISSTFQEKSKVNCTKDDDEPTFNMLKAFVEESGMEQIDRKFLRDNALTLLAAGRDTISSSLSWFFWLVSTHPLVEAKILEEMRANFITKEEYWLITSRLENLNKLVYLHGALCEALRLFPAVPFEHKCAVKSDVLPSGHRVNANTIVIYSPYSMGRMEQIWGEDCLEFKPERWISEKGSIIHIPSYKFIAFNAGPRSCLGKNITFIQMKIVAIALLCNFQFEVVEGHNNVCPCVSIILHMKHGLKVKVTKRGIN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0879 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 SUPERFAMILY Cytochrome P450 19 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Amo13g0879 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 507 - -
Amo13g0879 509 Gene3D Cytochrome P450 17 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0879 509 PANTHER CYTOCHROME P450 9 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0879 Amo-Chr13 10870911 10872440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0879 7 507 Cytochrome P450 AT2G23180 45.117 6.24e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0879 - - gmx:100791312 593.193