Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0878 ATGATGTACTTCCTAGATTACTTTGCTTTATTTGCAGCCATCATCTCATTCTTTTCCATCCACATTTGGAGGATCAATAGAAACTTACCTATCCCAAATTTGCCCTTATTTGGAATGCTACCAGCCGTGTTATGTAATAGTTCCAATATTCATGAATATGCGACCACAGCTTTAAGATACTATGGAGGTACTTTTAAGTTTAGAGGACCCTTGTTCACAAACATCAACTTTTACTTCACTAGTGATCCTATGAACGTGCACCACATTACAAGTAAGAACTTTGCCAACTACGGCAAAGGTTCTGAGTTTCATGAGATCTTTGAAATTCTTGGAGATGGAATCTTTAATGCTGATTCAGACAAGTGGAAGTACCAGAGGTACATGTTACAATCATTGTTTAAGCAAAACATCTTTGAGAACTTTGTTAAAAAGGTCATTCATAAGAAATTAGAATGTTACCTACTTCCACTTCTGAATGACATTTCAGAATCAAGAACTATTGTGGACTTGCAAGACATCTTTCAAAGGTTCACTTTTGACAGTATTTGCTCCATGGTGTTGGCATTTGATCCCAATTGCCTTCCTAACAAGCTCACTCGATTCCCTGAGGTTGCTGTTGAGAAAGCTTTCAACAAAATGGAGGATACAATTCTCTATAGACATCTGGTCCCAAGATGGTTCTGGAAGTTGCAGAGATGGCTCCAAATTGGACATGAGAAGGACTCCATTGCTATCCTTCGAATTGTCGAGCAATTCTTCCATGATCGTATATCATCCAGTCGGGAAGAGAAAAGTGGATTCAACTACACCAAAGATGATGAATCAAACTTTGACATGCTTAAAGCTCTTGTAGAGGAAAGTGGAATGGAACAGGTAGATCACAAGTATCTAAGAGACATTGCAGTTAATCTCTTAGCTGCTGGAAGGGACACAATTAGTGCAAGTCTATGTTGGTTTTTCTGGCTTGTTTCAACTCACCCTAATGTTGAAACCAAAATCCTTGCAGAAATCAGATCAAACTTCAAAACTAATGAAGAAAATTGGCTCATTTCAGGGGTGGAAGACCTTGACAAGCTAATTTACTTACATGGAGCTATATGTGAAGCTCTGAGGCTTTTCCCTCCGGTGCCATTTGAGCACAAATGTGCCATCAAATCTGATATACTTCCAAGTGGAGATTGTGTTGATGCAAATACTATGGTGTATTACTCCATATACTCAATGGGAAGGATGGAACACATTTGGGGAAAAGATTGCTTGGAATTTAAGCCAGAAAGGTGGATTTCGGAAAAAGGAATCAATATACAAGTACCATCATACAAGTTCATGGCTTTTAATGGAGGCCCAAGAAGTTGTTTGGGCAAAAATATAAGCTTTATCCAGTTGAAGATCATTGCCATTGCTTTGCTGTGGAACTTTCACTTCCAAGTGGTAGAAGGAAATTCCGTGTGTCCAAGTGTTTCCATTGTGCTACACATGAAGCATGGGTTGCAAGTCAAGGTTACTAAAAGAGGCAGTTGA 1521 0.3892 MMYFLDYFALFAAIISFFSIHIWRINRNLPIPNLPLFGMLPAVLCNSSNIHEYATTALRYYGGTFKFRGPLFTNINFYFTSDPMNVHHITSKNFANYGKGSEFHEIFEILGDGIFNADSDKWKYQRYMLQSLFKQNIFENFVKKVIHKKLECYLLPLLNDISESRTIVDLQDIFQRFTFDSICSMVLAFDPNCLPNKLTRFPEVAVEKAFNKMEDTILYRHLVPRWFWKLQRWLQIGHEKDSIAILRIVEQFFHDRISSSREEKSGFNYTKDDESNFDMLKALVEESGMEQVDHKYLRDIAVNLLAAGRDTISASLCWFFWLVSTHPNVETKILAEIRSNFKTNEENWLISGVEDLDKLIYLHGAICEALRLFPPVPFEHKCAIKSDILPSGDCVDANTMVYYSIYSMGRMEHIWGKDCLEFKPERWISEKGINIQVPSYKFMAFNGGPRSCLGKNISFIQLKIIAIALLWNFHFQVVEGNSVCPSVSIVLHMKHGLQVKVTKRGS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0878 506 PANTHER CYTOCHROME P450 10 504 - -
Amo13g0878 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 Gene3D Cytochrome P450 20 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 Pfam Cytochrome P450 32 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 SUPERFAMILY Cytochrome P450 31 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0878 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 504 - -
Amo13g0878 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0878 Amo-Chr13 10836826 10838346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0878 31 506 Cytochrome P450 AT2G23180 42.975 1.61e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0878 - - adu:107477001 837.025