Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0873 ATGGGAAGAAAAAGAACAAGATCCTCTGTTTTCTACTCTGTTTTCTTCGTCTCTGTTCTCTGTTTTCTCTCTCAACTTGCAACCTCAGAGGACGATTCCCAAGCGCTTTTGGCACTGAAATCTTCCATAGACGCACACAACAAGCTTCCATGGCGACCAGGCAGCGATGTCTGCACATGGCAAGGTGTCAAAGACTGCTTCAATGGAAGGGTAAGAAAGCTTGTTATAGAATACTCCAACCTCACCGGAACCTTAGAATCGAAGATCCTGAACCGTTTGGATCAGCTTCGAGTTCTAAGCTTCAAAGGGAACTCACTCTCTGGTCAAATTCCACAACTTTCAAGCTTAGTCAACCTCAAATCAATTTTCCTAAACGACAACAACTTCTCCGGAGAGTTTCCGGCCTCTGTTTCCGACCTCCATCGTGTAAAAGTCATAGTTTTGTCAGGGAACAGAATCTCCGGCGACATTCCGGCGTCGTTGCTGAATCTCCGGCGACTCTACATGCTCTACTTGGAGGACAACTTGTTCACCGGGAAAATCCCGGGGTTCAACCAATCAAGTCTCAGGTACTTAAACGTTTCGAATAACAAACTCTCCGGCGAGATCCCGGCGACTCCGGCATTGGTACGGTTCAATGCTTCTTCGTTTTCCGGCAACACTAATCTCTGCGGCGATCAAGTCCACGTGCCATGCAAAAGTAACATCCTTTTGCCTCCTTCTATGAGCCCAAGTTCCTCCACGGTTCCAACAACAGCAAAGAAAAAAACATCATCGAACCGCACGAAACTAATCAAGATTATTGGAGGAACCGTTGGTGGTGTTGTTTTGTTGCTCATTGTTTTGGTTCTTGTCTTCTTCACCATTTGTAGAAACCGTAGGAAGAGGGTAGGTGCTGGAGCTAGAAGGAAAGGAAATGGGGTTGGAAGTGTGGAGGAAGTTGAAGATGTTGGCGGCGGAGGAGGCGGCGGCGGGGGCGGTGGCAGCAGTGGTAACAACGAAGGGAAACAAGGTGGTTTTGCATGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCTTAGGAGCAGGGGATAATAGGGAAATGAGTTACACATTAGAGGATTTGCTTAAGGCTTCAGCTGAGACACTTGGGAGGGGCATTATGGGAAGTACATATAAGGCAGTTATGGAATCAGGGTTTATTGTGACTGTTAAGAGGTTGAAGGATGCTAGGTACCCTAATTTGGATGAGTTTAAGGCACATATTGAAGTTCTTGGTAGGCTTAGGCACCCTAATTTGGTCCCACTTAGGGCTTATTTTCAGGCTAAGGAGGAAAGGCTTCTTGTTTATGATTATTTCCCTAATGGCAGCCTCTTCTCTCTCATTCATGGATCAAAAACATCCGGTGGAGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATCGCCGAAGATCTCGCGACCGGCCTACTCTACATCCACCAAAACCCTGGCTTAACTCATGGAAACCTTAAATCTTCTAATGTCTTGCTGGGTTCGGACTTCGAATCCTGTCTTACTGACTATGGACTCACCATGTTCCTTAACCCTGACTCAATGGATGAACCAAGTGCCACCTCTTTATTCTACAGAGCACCCGAATGCAGAAGCTTCCAGAGGTCTCACACGCAACCGGCCGATGTATACAGCTTCGGAGTCCTTCTCCTGGAACTCTTAACAGGAAAAACTCCCTTCCAAGACCTTGTCCAAGAACACGGCTCGGATATACCAAGATGGGTTAAATCGGTTCGTGAGGAAGAGACAGAGTCCGGGGATGATCCTTCCTCGGGCAATGAAGCATCCGAAGAGAAGCTTCAAGCTCTCTTGAACATTGCAATGGCATGTGTTTCGCTTGTGCCGGAGAACCGGCCGTCGATGAGGGAAGTTCTGAAGATGATAAGAGACACAAGAGGGGAAGCTCAGGTATCATCAAATAGTAGTGATCATTCACCAGGTAGATGGTCAGATACAGTTCAAAGCTTTCCAAGGGAAGAACACTTGAGCATATGA 2028 0.4714 MGRKRTRSSVFYSVFFVSVLCFLSQLATSEDDSQALLALKSSIDAHNKLPWRPGSDVCTWQGVKDCFNGRVRKLVIEYSNLTGTLESKILNRLDQLRVLSFKGNSLSGQIPQLSSLVNLKSIFLNDNNFSGEFPASVSDLHRVKVIVLSGNRISGDIPASLLNLRRLYMLYLEDNLFTGKIPGFNQSSLRYLNVSNNKLSGEIPATPALVRFNASSFSGNTNLCGDQVHVPCKSNILLPPSMSPSSSTVPTTAKKKTSSNRTKLIKIIGGTVGGVVLLLIVLVLVFFTICRNRRKRVGAGARRKGNGVGSVEEVEDVGGGGGGGGGGGSSGNNEGKQGGFAWEGEGLGKLVFLGAGDNREMSYTLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPNLDEFKAHIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSMDEPSATSLFYRAPECRSFQRSHTQPADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPRWVKSVREEETESGDDPSSGNEASEEKLQALLNIAMACVSLVPENRPSMREVLKMIRDTRGEAQVSSNSSDHSPGRWSDTVQSFPREEHLSI* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0873 675 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Amo13g0873 675 ProSiteProfiles Protein kinase domain profile. 370 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0873 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 665 - -
Amo13g0873 675 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 8 665 - -
Amo13g0873 675 MobiDBLite consensus disorder prediction 586 607 - -
Amo13g0873 675 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Amo13g0873 675 Gene3D Ribonuclease Inhibitor 185 235 IPR032675 -
Amo13g0873 675 Gene3D Transferase(Phosphotransferase) domain 1 446 662 - -
Amo13g0873 675 SUPERFAMILY Protein kinase-like (PK-like) 374 650 IPR011009 -
Amo13g0873 675 MobiDBLite consensus disorder prediction 644 675 - -
Amo13g0873 675 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Amo13g0873 675 SUPERFAMILY L domain-like 29 224 - -
Amo13g0873 675 Gene3D Phosphorylase Kinase; domain 1 353 445 - -
Amo13g0873 675 Pfam Protein kinase domain 373 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0873 675 MobiDBLite consensus disorder prediction 643 675 - -
Amo13g0873 675 MobiDBLite consensus disorder prediction 301 337 - -
Amo13g0873 675 Pfam Leucine Rich Repeat 188 205 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0873 Amo-Chr13 10804237 10809829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0873 13 675 Receptor kinase-like Gene Family AT1G60630 61.826 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo13g0873 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0873 - - gmx:100820186 960.288