Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0868 ATGGATTGCATGAGAATCCAAAGCACCTTGTCTCATAGGAAGAACTGGAAATATGATGTGTTTGTGAGTTTCAGAGGCGAAACTCGCAACAACTTCACCGATCATCTTTATGCTGCTCTCTGCAGACACGGCATAGTTGCCTTCAGGGATGATACTAAGCTCGAGAAAGGAGGACTTATATCAGAAGGGCTTCTGGAAGCTATTGAAGGATCACAGGTTCTGATTGTGGTCTTCTCAATGAATTATGCTTCCTCCACAAGGTGCTTGCAAGAACTAGCAAAGATAGCTGATTGCATTCAAATACCGGGACACCGTGTTCTGCCTGTTTTCTGTGATGTGAGTCCTTCTGAGGTCAGAAAGCAAAGTGGAAACTATGAAGAAGCCTTTGTGGAACATGAAGAAAGATTCAAAGATGATGCAGAGATGATGGAGCAAGTGCAAAGATGGAGGGGAGCTCTAACACAAGTAGCCAATCTCTCTGGCTGGGATTTGAAGGATAACATGCTGAGTCCCAAACCATCATCAAGTCTATCCAATGATATAGTTGGGATGCACTCCCCTTTAGAAAAACTAGAAAAGCTTCTATCAACTCTTGTTACTATTTTATATGAAAAAATCTCTCATCAATACGATGTTTCATGTTTTGTAGATGATGTAAGTAAAACTTACGAAGATTATGGCCCACTTGGTGTACAAAAGCGACTTCTTTGTCAAGCTTTCATGGAAGAAGATTTTCTTTTATCCAACCCTTCATTGGCAAATAATCTAATTCAAAATAGGTTATGCCATAGAAAGGTTTTCATAGTTCTGGATAATGTTGAAAAGGGGATTCAGTTGGAGAAATTGGCTATAAAACGGAAAAGGCTAGGCAGTGGGAGTAGAATAATCATAATTTCTAGAGATGAACATATATTGAGAGAATATGGGGTGGATGGTATTTACAAAGTTCAACTGTTAAATGATGAGAATGCTCTCCGATTATTTTGCAAAAAAGCTTTCAAATGTAATTATGTTGCAAAAGATTATGAAAGCCTCACAAATGTTGCATTAACATATGCTAATGGACTTCCGTTAGCAATTAGAGTATTCGGTTCATTTTTGTTTGGGCGAGATGTTTCTGAGTGGAGTAGTGCATTGGATAGACTGAAAGAAAATCCAACAAAAGATATTATGGATGTGCTTCGAATTAGTTTTGATGGACATGAGGATATGGAAAAGGAAATATTTCTTGATATTGCATGCTTTTTTTCCGATGAAATTTTCATTGATAAATCACTCACAACTCGTGATCAGTGGAAGATAGTAATGCATGACTTGTTGATAAAATTGGGTAGAAGTATTGTTCGAGAAAAAACACCCAAAGAACCAAGAAATTGGAGCAGGTTATGGAATCAAAAGGATCTAAGCGATGTCTTGTGGGAAAACAAGAATCTAAATAATTTTAATATTCTGAAGTTTCAGACAGCAGATAACATTGAAGCAATAGTTCTTCCAAGATATGAAGAAATTAGAGAAGGATTGTCAGTTGAAGCTTTATCACAAATGAATCGTCTGAAATTACTCATACTTGGCAAACCAAATAAACTCGTTAAACTAATCCTACTTTATAGCAATATCAAAGAACTCTGGGAGGGAATAAAGAATTTACATAATTTGACACATATGGAACTATGTCATTCCAAAAATCTCATAAAGATACCAAATTTATCTGGGGCCTCAAATCTTTCGCGCCTTGATCTTGAAGGATGTGTTGCACTTGTTTACCTTGATCCATCCATTGGTTCTTTAGAAAAGCTTCATTTCTTGAATCTTGAAAACTGCAAAAATCTTAGTCCGTGGCAGAGAGAGCAGTTGAAAAAGTTGGATCCAGATCAAAGTGTAGAAAGGCACATGACATCCTCCTCCATGTGCAAAACTCTTACAAGGCCTTTCCAATTTTTGTATTCTAGAAGGCGTGCCAATTCAGTTGGTTTGTTGGTGCCTTGTTTGTCTCGTTTTCCAGCTTTGGTAACTCTTGACATAAGTTTCTGTAATTTACTTCAAATCCCCGAAGCTATTGGAAACTTACGTTGTTTAGAAAGTTTGAACATGGGAGGAAACAATATTTGGTTGCCTAGCACCTTTTTTCCCATAGGAGGACGTAGCCGTGGAAGAGATTACGATGCAGGAATATATGTTTTCAACTGCCCAAATTTGAGTGACACGGAAGGTTGTCGTGTCACAGTTATTTCATGGATGATAAAAATGATTCAGGTGTACATGCAATGCTCTATCCCCAGATACATCATCGATGTCGTGATTCCAGGAGCTGAAATTCCATGGTGGTTCAACCGACAGAATACGGCGGGTAGTTCAGTGAGCCTGGAGCCATCTCCCATTCTGGAGGACAATAATTGGATAGGCATTGCTTGTTGTGTAATATTTGTTGTACATGATGCTCCATCGAAATGGCTTGAAGAAGCCAATCATTCTCCTGTTCTTGGTTGTGGTTTTCATGGTTATCAGCTTGGGGGCAAATATGCCGTTGTTCCAATCCGTCTCAAGCAAGATTTGATTGCAACTGAATTAGATCATATGTGGCTAATATTTTTCTCCCGGGAACTTTTCATTAATGGTTATATAAGTGATCTAAAAGAAGGAGCATCTGATCTTGATGGTATTGAATTGGACACCATGAGTGATTATCCAGAAGTAGTAGAAGTGAGGAGTTAA 2712 0.3816 MDCMRIQSTLSHRKNWKYDVFVSFRGETRNNFTDHLYAALCRHGIVAFRDDTKLEKGGLISEGLLEAIEGSQVLIVVFSMNYASSTRCLQELAKIADCIQIPGHRVLPVFCDVSPSEVRKQSGNYEEAFVEHEERFKDDAEMMEQVQRWRGALTQVANLSGWDLKDNMLSPKPSSSLSNDIVGMHSPLEKLEKLLSTLVTILYEKISHQYDVSCFVDDVSKTYEDYGPLGVQKRLLCQAFMEEDFLLSNPSLANNLIQNRLCHRKVFIVLDNVEKGIQLEKLAIKRKRLGSGSRIIIISRDEHILREYGVDGIYKVQLLNDENALRLFCKKAFKCNYVAKDYESLTNVALTYANGLPLAIRVFGSFLFGRDVSEWSSALDRLKENPTKDIMDVLRISFDGHEDMEKEIFLDIACFFSDEIFIDKSLTTRDQWKIVMHDLLIKLGRSIVREKTPKEPRNWSRLWNQKDLSDVLWENKNLNNFNILKFQTADNIEAIVLPRYEEIREGLSVEALSQMNRLKLLILGKPNKLVKLILLYSNIKELWEGIKNLHNLTHMELCHSKNLIKIPNLSGASNLSRLDLEGCVALVYLDPSIGSLEKLHFLNLENCKNLSPWQREQLKKLDPDQSVERHMTSSSMCKTLTRPFQFLYSRRRANSVGLLVPCLSRFPALVTLDISFCNLLQIPEAIGNLRCLESLNMGGNNIWLPSTFFPIGGRSRGRDYDAGIYVFNCPNLSDTEGCRVTVISWMIKMIQVYMQCSIPRYIIDVVIPGAEIPWWFNRQNTAGSSVSLEPSPILEDNNWIGIACCVIFVVHDAPSKWLEEANHSPVLGCGFHGYQLGGKYAVVPIRLKQDLIATELDHMWLIFFSRELFINGYISDLKEGASDLDGIELDTMSDYPEVVEVRS* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0868 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 196 487 IPR044974 GO:0006952
Amo13g0868 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 527 611 IPR044974 GO:0006952
Amo13g0868 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 146 IPR044974 GO:0006952
Amo13g0868 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 412 IPR027417 -
Amo13g0868 903 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Amo13g0868 903 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Amo13g0868 903 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 196 487 - -
Amo13g0868 903 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 527 611 - -
Amo13g0868 903 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 146 - -
Amo13g0868 903 PRINTS Disease resistance protein signature 594 610 - -
Amo13g0868 903 PRINTS Disease resistance protein signature 260 274 - -
Amo13g0868 903 PRINTS Disease resistance protein signature 353 367 - -
Amo13g0868 903 Pfam NB-ARC domain 203 388 IPR002182 GO:0043531
Amo13g0868 903 Gene3D - 14 193 IPR035897 -
Amo13g0868 903 Pfam TIR domain 17 169 IPR000157 GO:0007165
Amo13g0868 903 Gene3D - 196 310 IPR027417 -
Amo13g0868 903 Gene3D - 318 401 IPR042197 -
Amo13g0868 903 Gene3D Ribonuclease Inhibitor 645 715 IPR032675 -
Amo13g0868 903 SUPERFAMILY L domain-like 436 705 - -
Amo13g0868 903 Pfam C-JID domain 767 831 IPR045344 -
Amo13g0868 903 Gene3D Ribonuclease Inhibitor 461 642 IPR032675 -
Amo13g0868 903 SMART till_3 17 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0868 Amo-Chr13 10766165 10769492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0868 196 613 WRKY Transcription Factor Family AT5G45050 28.512 9.44e-47 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0868 - - adu:107476580 992.645