Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0862 ATGATTTTTATTTCTTCACATACACAATTATGGTTGATACTTGATAGATTATCTATTACAATATCTTATATATGTAGGTTTTCTTCTGCTGTCTTGTGTGAAGATTTTTGTTTCTCTCTTCTTTTTTTTCTTGTTCTTTCTAGGTCACATTCTGCTGAAATTGAAAAAATTGTCAAAACAGTGACCAAGATATTGGGTCCCAGATCATCATCAAGTCTATCTAATGATATAGTTGGGATGGAGTTCCCTCTACAAAAACTAGGAAAGCTTCTAGTTTTGGACTCAGATGATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGTATAGGAAAAACAACTCTTGCTAGCAGATTATATGAAAAAATCTCTTATCAGTATGATGTTTCATGCTTTATGGATGATGTAAGTAAAACATATAGAGATTGTGGTTCACTTGGTATGAAAAAGCAGCTTCTTTGTCCAGCTTTCATGGAAGAAGATTCTCYAATATGCAATATTTTAATGGCAGATAATTTGATTSAAAATATGTTACACKATAGAAAGGTTCTSATAGTTTTGGATAATGTTGATCAGAGAATTCAGTTGGAGAAGTTGGCTTTAAAACGGGAATGGTTAGGTAGAGGGAGTAGAATAATCATAGTTTCTAGAGATGAGCATATATTGAGAGAGTATGGAGCGGATGAAGTTTTCAAAGTTCCGCTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGCAGAAAAGCTTTCAAATGTAATCATGTTGCAAAAGATTATGAAGGCCTCACAGATTCTGCATTAGCATATGCTAATGGACTTCCTTTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTCTCTGAATGGAGTAGTGCATTGGTTAGACTAAAAGAAACTCCAACAAAAGATATTATGGATGTGCTTCGAATCAGTTTTGATGGACTTGAGGATCCGGAAAAAGAAATATTTCTTGATATTGCCTGTTTTTTTCCCAATGACATTGAAAACTATGTAAAAGATATTTTACGTATTCGAGGATTCCATCCTGATAATGGTATAAAAGTTCTCATTGAAAAATCACTCATAACCCGTGATCGGTGGAAGATCACTATGCACGATTTGTTGAGAGACTTGGGAAGAAGTATTGTTCGAGAAAAATCACCCAAAAAACCGAGAAAGTGGAGCAGGTTATGGAATCATAAGGATCTAAGCAATGTCTTGCGAGAAAACAAGCCAGCAGAGAATGTTGAAGCCATAGTTTTGCCAACAAATGATGAAATAAGAGAAGAGTTGTCACTAAAAGCTTTATCAAAAATGAGTCGCCTAAAGTTACTCAAACTTGGCCAAGTGAAAGTGAATTTCTCAGGCAAGCTGCATTTTCTTTCTAATGAGTTGGGATATCTTTCTTGGAAAGAATATCCTTTCACATGTTTGCCATCAAGATTTCAACCAACTCAACTCGTTAAATTAATCCTACGTTATAGTAACGTCAAAGAACTCTGGAAGGGAATAAAGGATCTACATAAATTGACACATTTAGAGCTATGTTATTCCAAAAGTCTCGAAAAGATACCAAATTTATCTCAGGCTCCAAATCTTTCGCACATAAATCTTAAAGGATGTGTGAAACTTGTTCACCTTGATAAATCCATTGGTGCTCTAGAAAAGCTTAGTTTCTTGAATCTGGCAAACTGCAAAAGTCTTGTTAGTATTCCGAGCAATGTATTTGGTCTTAGATCTCTTTGTGATTTAAATTTATCTGGCTGTTCGAAATTAATTGGATATCGGTTGTTAGAGAAACCAAAAGAAAACGAGCAAAGTGTGGCATCCTCCATATGCAAAGCTCTTACAAGGCCTCTCAATTTTTCGTCTTCTAGAAGGCGTGCCGATTCAGTTGGTTTATTGGTGCCTTCTTTGTCTCATTTCCCTTTGGTAACTCTTGACATAAGTTTTTGTAATCTAGTTGAGATCCCGGATGCTATTGGACTGTTACATTGTTTAGAAGATTTAAACATAGGGGGAAACAATATTGTTACGCTACCTCATTCCATCAATGAACTTCCCAAGCTAAGGCAGTTGAACTTGCAGTACTGTAAGCAACTAAAGTGGTTGCCAAGTACCCTTTTGCCCATAGGAGAAGGTAGCCATGGAAGACTTTACTATGGAGGAATATTTGTGTTCAACTGCCCTAATTTGAGTGACACAGAAAGTTGTGGTGTCACAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACATGCAATCTTCTTCACCTAGATGCGTCATTCAAGTTGTTATTCCAGGAACTGAAATTCCAAGGTGGTTCAACAATCAGAATGAGGGTAGTTCAATGAAGCTGGATCCATCTCCTATTCTGAATGACAATAATTGGATTATTGGCATTGCATGTTGTGTGACATTTGTTGTACATGATACTCCAACTCAATTGCCTGAAGAACCGAAATATCCTGGTGATCTTGGATGCGGTTTTCGTCTTCGGTCTGGGGGAAGTTATTTTGCGGTTCCAATACGTCTTAAGAAAGATTTGATCACAACTGAATTAGATCATATGTTGCTAATATTTTTCTCCCGGGACAGGATCATTGATCATTATACAAGTCATTTAAAAGAGGGAAGATGTGATCTTGATGGTATTGAATTGGCCACCTTGAGTGAATATCCAAAAGAAATAATACAAGTGAAGAGTTGTGGTTACCGTTGGGTATGTAAGGAAGATCTGGAACAATTAAACTCAACAATGATGTATAGTGCCAATTCTTCAACTCAGAATAAGAAGGGCAAAATCCAGAGCACCTTGTCTCATAGGAAGAATTGGAAATATGATGTGTTTGTGAGTTTCAGAGGCGAGACTCGCTTCAACTTCACCGATCATCTTTTTGCTGCTCTCCACAGACACGGCGTACTTGCCTTCAAGGATGATACAAAAATCGAGAAAGGAGGACCTATATCAGCAGGGCTTGTGCAAGCTATTGAAGGATCACAGGTTCTGATTGTGGTCTTCTCTATCAACTATGCTTCCTCTACATGGTGCTTGCAAGAACTCGCAAACATAGCTGATTGCATTCAAATCCCAGGACACACTGTTCTGCCAGTTTTCTATGATGTGAGTCCAACTGAGGTGAGAAGGCAAAGTGGGAAATTTGAAAAAGCATTTATGAAACATGAAGAGAGATTCAAAGATGATGCAGAGATGATGGAGCAAGTGGCAAGATGGAGGGGAGCTCTAACACAAGTAGCCAATCTCTCTGGCTGGGATGTGAAGAAGGATAAGTCACAATCTGCTGAGATTGAAAAAATTGTCAAAGCGGTAACAAACATATTGAGTCCCAAACCATCATCAAGTCTATCTAATGATGTAGTTGGGGTGTACTCCCATTTAGAAGAACTAGAAAAGCTTCTAGTTTTGGACTCGCATGATGATGTTCGAGTTTTAGGCATTTGTGGAATGGGTGGCATAGGAAAGTCAACTCTTACCACCATTTTATATGAAAAGATCTCTCATCAATACGACATTTCATGCTTTATGGATGATGTAAGCAAAACTTATGCAGATTGTGGTCCACTTGGTGTGAAAAAGCAACTTCTTTGTCAAGCTTTCGTGGAAGAAGAATTTCTAATATGCAATCTTTCGGCAGCAACTAATTTGATTCAAAATAATTTATGCCATAGAAAGGTTCTCATAGTTCTGGATAATGTTGATCAGGGGATTCAGTTGGAGAAGTTGGCTTTAAAACGGGAATGGCTAAGTAGAGGGAGCAGAATAATCATAATTTCTAGAGATGAACATATATTGAGAGAGCATGGAGTGGATGATGTTTACAAAGTTCAACTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGTAGAAAAGCTTTCAAATGTAACCATGTTATAGAAGGTTATGAAAGCCTGACAAATTCTGCATTAACATATGCTAATGGACTGCCATTAGCAATTAAAGTATTGGGTTCTTTTTTATTTGGCCGAAGTATATCCGAGTGGAGGAGTGCTTTGGTTAGATTGAGAGAAAACCCAACAAAAGATATTATGGATGTGAAATGTTTCTTGATATTGCATGTTTTTTTTTCTAACGAGAATGAATATTATGTAAAGAACATTTTATGTATTCGAGGGTTTCATCCTGATATTGGTATAAGAATTCTCATTGATAAATCACTTATAACTTGTGACTGGTCGGCCATAGTTATGCATGATTTGTTGAGAGAGTTGGGTAGAAGTATTGTTCGAGAAAAATCACCCAAAGAGCCAAGAAAGTGGAGCAGGTTATGGAATCAAAAGGATCTAAGCAATGTCTTGCGGGAAAACAAGATAGCAGAAAATCTTGAAGCCATAGTTCTACCAAGATTTCTTGAAATTAGGGAAGAGTTGTCAGTTGAAGCTTTATCACAAATGAGCTGCCTTAAATTACTCATACTCACAGAAGTGAATTTTTGGGGATGCCTTAATTTTCTTTCTAATGAGTTGGGATATCCTTTCACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAATTAATCCTGCATCACAGCAACATCAAAGAACTCTGGGAGGGAATAAAGGATCTACATAATTTGACACATTTGGAACTATGTTATTCCAAAAGCCTTGTAAACATACCAAATTTATCTCAGGCCCCAAATCTTTCGCGACTAGATCTTAAAGGATGTGTTAAACTTGTTCGCCTTCATCCATCCATTGGCTGTTTAAAAAACCTGGGTTACTTGAATCTGGAAAACTGCAGAAGTCTTGTTAGTATTCCCAACAACATATTTGATCTTAATTCTCTTTATGATTTAAATCTATCTGGCTGTTGGAAATTACTTAAAGATCAGTTGTYAGAGMAACCAAGGCAAAGCAAGCAGTTGAATACAGGTCAAAGTGTACAAAGGCACATGACATCCTCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTGTCTTCTAGAAGGTGCTCCAATTCAATTGGTTTGTTGGTGCCTTCTCTGTCTCGTTTCCCAGCTTTGGTATCTCTTGACATAAGTTTCTGTAATCTAGTTGAAATTCCTGATGCAATTGGACAGTTATGTTGTTTAGAACGTTTAAACATAGGGGGGAACAATTTTGTTACACTACCTCATTGCATCAAGGAACTTCCCAAGCTAAGGGAGTTGAACTTGCAGTACTGTAAGCAACTAAAGTGGTTGCCAAGTACCCTTTTGCCCATAGGAGGAGGTAGCCATGGAAGACTTTACTATGGAGGAATATTTGTGTTCAACTGCCCTAATTTGAGTGACACAGAAAGTTGTGGTGTCACAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACATGCAATGCTCTTTCCCCAGATGTTCAATTAAAGTGGATCCATCTCCCATTGTGGATGACAATAATTGGATTGGCATTGCTTCTTGTGTGGCATTTGTTGTACATGGTGCTCCAACTGAATATCCTCCTATTCTATTTGGTTGTGGTTTTCGTCGTAATCCAGATAAGGCCGTTTGTTCCATTGCTCCAATACGTCTTAAGAAAGATTGGATCACAACTGAATTAGATAATATGTTGTTAATTGTTTTAAAAGAAGGAGCATCTGATCTTGATGGTATTGAATTGGTTGCATTGACTCGTTATCTAGAAGAAGTAGTAGAAGTGAAGAGTTGTGGGTACGGTTGGGTATTTAAGGAAGATTTGGAACATTTAAACCTAAAGAGGATGTATAGCGCCAACTCTTCAGCTCACAATCAGAAGCACAAGTTTTTGAAAATTCAAGATGACCAATAG 5847 0.372 MIFISSHTQLWLILDRLSITISYICRFSSAVLCEDFCFSLLFFLVLSRSHSAEIEKIVKTVTKILGPRSSSSLSNDIVGMEFPLQKLGKLLVLDSDDDVRVVGICGMGGIGKTTLASRLYEKISYQYDVSCFMDDVSKTYRDCGSLGMKKQLLCPAFMEEDSXICNILMADNLIXNMLHXRKVLIVLDNVDQRIQLEKLALKREWLGRGSRIIIVSRDEHILREYGADEVFKVPLLNDENALQLFCRKAFKCNHVAKDYEGLTDSALAYANGLPLAIKVLGSFLFGRDVSEWSSALVRLKETPTKDIMDVLRISFDGLEDPEKEIFLDIACFFPNDIENYVKDILRIRGFHPDNGIKVLIEKSLITRDRWKITMHDLLRDLGRSIVREKSPKKPRKWSRLWNHKDLSNVLRENKPAENVEAIVLPTNDEIREELSLKALSKMSRLKLLKLGQVKVNFSGKLHFLSNELGYLSWKEYPFTCLPSRFQPTQLVKLILRYSNVKELWKGIKDLHKLTHLELCYSKSLEKIPNLSQAPNLSHINLKGCVKLVHLDKSIGALEKLSFLNLANCKSLVSIPSNVFGLRSLCDLNLSGCSKLIGYRLLEKPKENEQSVASSICKALTRPLNFSSSRRRADSVGLLVPSLSHFPLVTLDISFCNLVEIPDAIGLLHCLEDLNIGGNNIVTLPHSINELPKLRQLNLQYCKQLKWLPSTLLPIGEGSHGRLYYGGIFVFNCPNLSDTESCGVTVISWMIKMIQVNMQSSSPRCVIQVVIPGTEIPRWFNNQNEGSSMKLDPSPILNDNNWIIGIACCVTFVVHDTPTQLPEEPKYPGDLGCGFRLRSGGSYFAVPIRLKKDLITTELDHMLLIFFSRDRIIDHYTSHLKEGRCDLDGIELATLSEYPKEIIQVKSCGYRWVCKEDLEQLNSTMMYSANSSTQNKKGKIQSTLSHRKNWKYDVFVSFRGETRFNFTDHLFAALHRHGVLAFKDDTKIEKGGPISAGLVQAIEGSQVLIVVFSINYASSTWCLQELANIADCIQIPGHTVLPVFYDVSPTEVRRQSGKFEKAFMKHEERFKDDAEMMEQVARWRGALTQVANLSGWDVKKDKSQSAEIEKIVKAVTNILSPKPSSSLSNDVVGVYSHLEELEKLLVLDSHDDVRVLGICGMGGIGKSTLTTILYEKISHQYDISCFMDDVSKTYADCGPLGVKKQLLCQAFVEEEFLICNLSAATNLIQNNLCHRKVLIVLDNVDQGIQLEKLALKREWLSRGSRIIIISRDEHILREHGVDDVYKVQLLNDENALQLFCRKAFKCNHVIEGYESLTNSALTYANGLPLAIKVLGSFLFGRSISEWRSALVRLRENPTKDIMDVKCFLILHVFFSNENEYYVKNILCIRGFHPDIGIRILIDKSLITCDWSAIVMHDLLRELGRSIVREKSPKEPRKWSRLWNQKDLSNVLRENKIAENLEAIVLPRFLEIREELSVEALSQMSCLKLLILTEVNFWGCLNFLSNELGYPFTCLPSSFQPNKLVKLILHHSNIKELWEGIKDLHNLTHLELCYSKSLVNIPNLSQAPNLSRLDLKGCVKLVRLHPSIGCLKNLGYLNLENCRSLVSIPNNIFDLNSLYDLNLSGCWKLLKDQLXEXPRQSKQLNTGQSVQRHMTSSICKTLTRPLHFLSSRRCSNSIGLLVPSLSRFPALVSLDISFCNLVEIPDAIGQLCCLERLNIGGNNFVTLPHCIKELPKLRELNLQYCKQLKWLPSTLLPIGGGSHGRLYYGGIFVFNCPNLSDTESCGVTVISWMIKMIQVNMQCSFPRCSIKVDPSPIVDDNNWIGIASCVAFVVHGAPTEYPPILFGCGFRRNPDKAVCSIAPIRLKKDWITTELDNMLLIVLKEGASDLDGIELVALTRYLEEVVEVKSCGYGWVFKEDLEHLNLKRMYSANSSAHNQKHKFLKIQDDQ* 1949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0862 1948 SMART LRR_typ_2 1686 1709 IPR003591 -
Amo13g0862 1948 SMART LRR_typ_2 667 690 IPR003591 -
Amo13g0862 1948 SMART LRR_typ_2 1732 1756 IPR003591 -
Amo13g0862 1948 SMART LRR_typ_2 1589 1613 IPR003591 -
Amo13g0862 1948 SMART LRR_typ_2 557 581 IPR003591 -
Amo13g0862 1948 Pfam NB-ARC domain 1137 1358 IPR002182 GO:0043531
Amo13g0862 1948 Pfam NB-ARC domain 89 305 IPR002182 GO:0043531
Amo13g0862 1948 Pfam TIR domain 950 1128 IPR000157 GO:0007165
Amo13g0862 1948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 329 IPR027417 -
Amo13g0862 1948 Pfam C-JID domain 770 917 IPR045344 -
Amo13g0862 1948 Gene3D - 1288 1366 IPR042197 -
Amo13g0862 1948 Gene3D - 235 319 IPR042197 -
Amo13g0862 1948 SUPERFAMILY Toll/Interleukin receptor TIR domain 946 1095 IPR035897 -
Amo13g0862 1948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1116 1363 IPR027417 -
Amo13g0862 1948 SMART AAA_5 1151 1290 IPR003593 -
Amo13g0862 1948 SMART AAA_5 98 237 IPR003593 -
Amo13g0862 1948 Gene3D Ribonuclease Inhibitor 1654 1764 IPR032675 -
Amo13g0862 1948 Pfam Leucine Rich Repeat 489 508 IPR011713 -
Amo13g0862 1948 Pfam Leucine Rich Repeat 1521 1540 IPR011713 -
Amo13g0862 1948 SUPERFAMILY L domain-like 374 709 - -
Amo13g0862 1948 Pfam Leucine rich repeat 647 701 IPR001611 GO:0005515
Amo13g0862 1948 Pfam Leucine rich repeat 1687 1743 IPR001611 GO:0005515
Amo13g0862 1948 Gene3D - 1119 1283 IPR027417 -
Amo13g0862 1948 SMART till_3 950 1092 IPR000157 GO:0007165
Amo13g0862 1948 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1124 1749 - -
Amo13g0862 1948 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1124 1749 IPR044974 GO:0006952
Amo13g0862 1948 Gene3D - 67 229 IPR027417 -
Amo13g0862 1948 Gene3D - 944 1118 IPR035897 -
Amo13g0862 1948 ProSiteProfiles TIR domain profile. 949 1118 IPR000157 GO:0007165
Amo13g0862 1948 PRINTS Disease resistance protein signature 177 191 - -
Amo13g0862 1948 PRINTS Disease resistance protein signature 101 116 - -
Amo13g0862 1948 PRINTS Disease resistance protein signature 555 571 - -
Amo13g0862 1948 PRINTS Disease resistance protein signature 270 284 - -
Amo13g0862 1948 SUPERFAMILY L domain-like 1414 1751 - -
Amo13g0862 1948 Gene3D Ribonuclease Inhibitor 602 742 IPR032675 -
Amo13g0862 1948 Gene3D Ribonuclease Inhibitor 417 601 IPR032675 -
Amo13g0862 1948 Gene3D Ribonuclease Inhibitor 1445 1653 IPR032675 -
Amo13g0862 1948 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 71 873 - -
Amo13g0862 1948 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71 873 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0862 Amo-Chr13 10716442 10724573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0862 98 705 WRKY Transcription Factor Family AT5G45050 31.563 6.75e-76 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0862 - - adu:107476580 1142.49