Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0854 ATGACGAGCATAGTGAAGGAGATCCTGGCCAGCCCGATTCAGATGGCTGACACGGTCTCCAAGATGGCGGAAGAGGCGCAAAATTTCCGCAGCGATTGCCTCGACATCAAGGCCAAAACCGATAAGCTGGCCGCCCTCCTCCGCCAAGCCGCCAGGAACAGCAACGACTTGTACGAGAGGCCGACGCGCCGGATCATCGAGGACACCGAGCAGGTCCTCGACAAGGCCCTCATTCTCGTCGATAAATGCCGCGCCAACACCTTCATCAAACGCCTCTTCACCATCATCCCCACCACCGCACTCAAAAAAATATCCATGCAGTTGGAAAACTCCATCGGCGACGTCCAGTGGCTCCTCCGCGTCTCCGCCTCCGCAGACGAGCGCGACGACGAGTACCTCGGACTCCCTCCAATCGCCTCCAACGAGCCCATCCTCTGCCTCATCTGGGAACAAATCGCAAACCTCCTCTCAAACGGCTCCGTGGAGGAACGCTCCGACGCCGCAGCCTCCCTTGTTTCCCTGGCTCGCGACAACGACCGTTACGGCAAACTCATCCTGGAAGAAGGCGGCGTTCCCCCTCTTCTAAAACTCTTGAAGGAAGGCAAGTTAGAAGGGCAACAGAACGCAGCAAGAGCCATCGGTTTACTCGGGAAGGATCCAGAGAGCGTGGAGCACATCGTTAACGCCGGCGTTTCCTCCGTGTTCGCCAAAATCCTGAAAGACGGTCACATGAAGGTTCAAATTGAGGTGGCTTGGGCAATTTCTGAATTAGCAGCGAATCACCCAAAGTGCCAAGATCATTTCTCACAGAACAATTGCATAAGGTTGCTGGTTAGCCATCTGGCTTTCGAAACCATTCAAGAGCACAGTAAATACGCCGTTGTCAACAAGCATAAGATGATGAATTCAAATCAGGATCACTTCCCCTCTCATCCCATGGGAGCCAACCAAGCAAGTACACAGATGCAGAATTTGGTTAATGCCGTTAAGGGTAACCAACCCACAGTTCCAGCAATAATGACGGATCATAGCAGTAACACTAACCCAAAGGTGGTTAGTGATGGCGGTGGAAATATGAATATGAATACGAATACTATAACAGGGGCGAGTAGTATCGGCGGGAGGGAGTATGAGGACCCGAAGACTAAGGCGGAGATGAAGGCAATGGCAGCTAGAGCCTTATGGCAGCTGTGTAAAGGAAACCTCTCCATTTGCAACAACATAACAGAATCACGTGCTCTTCTCTGTTTTGCGGTTCTCTTAGAGAAAGGCACGGATGAGCTTCGTAGATACTCAGCTCTGGCCTTGATGGAGATAACTGCCGTGGCAGAGGAACACCCCGATCTGAGACGCTCCGCCTTCAAACCGACTTCCCCGGCGGCCAAAGCCGTGGTGGAGCAGTTCCTCAACGTCATCAAGAAAGGAGACAATAGCGATCTGCTCATACCGTGCGTCAGAGCCGTTGGAAATCTGGCAAGGACGTTCAGAGCCACGGAGACAAGGTTCATAGAGCCGTTGGTGAAGCTTCTAGATGAAAGAGAACCGGAAGTTTCAGTGGAAGCTGTGATTGCGCTTAACAAATTCGCTTGTACGGATAACTTCCTGCACAACACGCATTGCAGCGCCATAATCGAAGCTGGTGGCGCAAAGCACTTGGTCCAGCTGGTTTATTTCGCCGAGCAGTCGGTGCAGATTCCTTCGGTGATTCTTTTGTGTTATGTGGCGTTGCATGTGCCCAAGAGTGAGGCTCTTGCCCAAGAAGACGTTCCTATTGTTCTTGAATGGTGCACCAAGCAGGCGCATTTGATGGCTGACCCTGACATCGAAGCCCTCTTGCCAGAAGCAAAGAGCCGCTTGGAACTCTATCAATCAAGAGCAACAAGGGCATTCTATTCTAATTAA 1902 0.5205 MTSIVKEILASPIQMADTVSKMAEEAQNFRSDCLDIKAKTDKLAALLRQAARNSNDLYERPTRRIIEDTEQVLDKALILVDKCRANTFIKRLFTIIPTTALKKISMQLENSIGDVQWLLRVSASADERDDEYLGLPPIASNEPILCLIWEQIANLLSNGSVEERSDAAASLVSLARDNDRYGKLILEEGGVPPLLKLLKEGKLEGQQNAARAIGLLGKDPESVEHIVNAGVSSVFAKILKDGHMKVQIEVAWAISELAANHPKCQDHFSQNNCIRLLVSHLAFETIQEHSKYAVVNKHKMMNSNQDHFPSHPMGANQASTQMQNLVNAVKGNQPTVPAIMTDHSSNTNPKVVSDGGGNMNMNTNTITGASSIGGREYEDPKTKAEMKAMAARALWQLCKGNLSICNNITESRALLCFAVLLEKGTDELRRYSALALMEITAVAEEHPDLRRSAFKPTSPAAKAVVEQFLNVIKKGDNSDLLIPCVRAVGNLARTFRATETRFIEPLVKLLDEREPEVSVEAVIALNKFACTDNFLHNTHCSAIIEAGGAKHLVQLVYFAEQSVQIPSVILLCYVALHVPKSEALAQEDVPIVLEWCTKQAHLMADPDIEALLPEAKSRLELYQSRATRAFYSN* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0854 633 SMART arm_5 401 441 IPR000225 GO:0005515
Amo13g0854 633 SMART arm_5 457 493 IPR000225 GO:0005515
Amo13g0854 633 SMART arm_5 536 576 IPR000225 GO:0005515
Amo13g0854 633 SMART arm_5 219 259 IPR000225 GO:0005515
Amo13g0854 633 SMART arm_5 177 218 IPR000225 GO:0005515
Amo13g0854 633 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Amo13g0854 633 Gene3D - 141 301 IPR011989 -
Amo13g0854 633 Gene3D - 3 121 IPR036537 GO:0007166
Amo13g0854 633 PANTHER ARMADILLO REPEAT ONLY 1 1 630 - -
Amo13g0854 633 PANTHER ARMADILLO REPEAT ONLY 4 1 630 - -
Amo13g0854 633 Gene3D - 319 611 IPR011989 -
Amo13g0854 633 SUPERFAMILY ARM repeat 149 595 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0854 Amo-Chr13 10659566 10661535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0854 152 295 U-box Gene Family AT1G23030 26.389 6.74e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0854 - - gmx:100807066 895.96