Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0851 ATGACGAGCATAGTGAAGGAGATCCTGGCCAGCCCGATTCAGATGGCTGACACGGTCTCCAAGATGGCGGAAGAGGCGCAAAATTTCCGCAGCGATTGCCTCGACATCAAGGCCAAAACCGATAAGCTGGCCGCCCTCCTCCGCCAAGCCGCCAGGAACAGCAACGACTTGTACGAGAGGCCGACGCGCCGGATCATCGAGGACACCGAGCAGGTCCTCGACAAGGCCCTCATTCTCGTCGATAAATGCCGCGCCAACACCTTCATCAAACGCCTCTTCACCATCATCCCCACCACCGCACTCAAAAAAATATCCATGCAGTTGGAAAACTCCATCGGCGACGTCCAGTGGCTCCTCCGCGTCTCCGCCTCCGCAGACGAGCGCGACGACGAGTACCTCGGACTCCCTCCAATCGCCTCCAACGAGCCCATCCTCTGCCTCATCTGGGAACAAATCGCAAACCTCCTCTCAAACGGCTCCGTGGAGGAACGCTCCGACGCCGCAGCCTCCCTTGTTTCCCTGGCTCGCGACAACGACCGTTACGGCAAACTCATCCTGGAAGAAGGCGGCGTTCCCCCTCTTCTAAAACTCTTGAAGGAAGGCAAGTTAGAAGGGCAACAGAACGCAGCAAGAGCCATCGGTTTACTCGGGAAGGATCCAGAGAGCGTGGAGCACATCGTTAACGCCGGCGTTTCTTCCGTGTTCGCCAAAATCCTGAAAGACGGTCACATGAAGGTTCAAATTGAGGTGGCTTGGGCAATTTCTGAATTAGCAGCGAATCACCCAAAGTGCCAAGATCATTTCTCACAGAACAATTGCATAAGGTTGCTGGTTAGCCATCTGGCTTTCGAAACCATTCAAGAGCACAGTAAATACGCCGTTGTCAACAAGCATAAGATGATGAATTCAAATCAGGATCACTTCCCCTCTCATCCCATGGGAGCCAACCAAGCAAGTACACAGATGCAGAATTTGGTTAATGCCGTTAAGGGTAACCAACCCACAGTTCCAGCAATGACGGATCATACCAGTAACATTAACCCAAAGGTGGTTAGTGATGGCGGTGGAAATATGAATATGAATACTATAACAGGGACGAGTAGTATCGGCGGGAGGGAGTATGAGGACCCCAATACTAAGGCGGAGATGAAGGCAATGGCAGCTAGAGCCTTATGGCAGCTCTGTAAAGGAAACCTCTCCATTTGCAACAACATAACAGAATCACGTGCTCTTCTCTGTTTTGCGGTTCTCTTAGAGAAAGGCACGGATGAGCTTCGTAGATACTCAGCTCTGGCCTTGATGGAGATAACTGCCGTGGCAGAGGAACACCCCGATCTCAGACGCTCCGCCTTCAAACCGACTTCCCCGGCGGCCAAAGCCGTGGTGGAGCAGTTCCTCAACGTCATCAAGAAAGGAGACAATAGCGATCTGCTCATACCGTGCGTCAGAGCCGTTGGAAATCTGGCAAGGACGTTCAGAGCCACGGAGACAAGGTTCATAGAGCCGTTGGTGAAGCTTCTAGATGAAAGAGAACCGGAAGTTTCAGTGGAAGCTGTGATTGCGCTTAACAAATTCGCTTGTACGGATAACTTCCTGCACAACACGCATTGCAGCGCCATAATCGAAGCTGGTGGCGCAAAGCACTTGGTCCAGCTGGTTTATTTCGCCGAGCAGTCGGTGCAGATTCCTTCGGTGATTCTTTTGTGTTATGTGGCGTTGCATGTGCCCAAGAGTGAGGCTCTTGCGCAAGAAGATGTTCCTATTGTTCTTGAATGGTGCACCAAGCAGGGGCATTTGATGGCTGACCCTGACATCGAAGCGCTCTTGCCAGAAGCAAAGAGCCGCTTGGAACTCTATCAATCAAGAGCAACAAGGGCATTCTATTCTGTTAATTAA 1896 0.519 MTSIVKEILASPIQMADTVSKMAEEAQNFRSDCLDIKAKTDKLAALLRQAARNSNDLYERPTRRIIEDTEQVLDKALILVDKCRANTFIKRLFTIIPTTALKKISMQLENSIGDVQWLLRVSASADERDDEYLGLPPIASNEPILCLIWEQIANLLSNGSVEERSDAAASLVSLARDNDRYGKLILEEGGVPPLLKLLKEGKLEGQQNAARAIGLLGKDPESVEHIVNAGVSSVFAKILKDGHMKVQIEVAWAISELAANHPKCQDHFSQNNCIRLLVSHLAFETIQEHSKYAVVNKHKMMNSNQDHFPSHPMGANQASTQMQNLVNAVKGNQPTVPAMTDHTSNINPKVVSDGGGNMNMNTITGTSSIGGREYEDPNTKAEMKAMAARALWQLCKGNLSICNNITESRALLCFAVLLEKGTDELRRYSALALMEITAVAEEHPDLRRSAFKPTSPAAKAVVEQFLNVIKKGDNSDLLIPCVRAVGNLARTFRATETRFIEPLVKLLDEREPEVSVEAVIALNKFACTDNFLHNTHCSAIIEAGGAKHLVQLVYFAEQSVQIPSVILLCYVALHVPKSEALAQEDVPIVLEWCTKQGHLMADPDIEALLPEAKSRLELYQSRATRAFYSVN* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0851 631 MobiDBLite consensus disorder prediction 335 373 - -
Amo13g0851 631 SUPERFAMILY ARM repeat 149 592 IPR016024 -
Amo13g0851 631 PANTHER ARMADILLO REPEAT ONLY 1 1 627 - -
Amo13g0851 631 Gene3D - 3 121 IPR036537 GO:0007166
Amo13g0851 631 SMART arm_5 533 573 IPR000225 GO:0005515
Amo13g0851 631 SMART arm_5 454 490 IPR000225 GO:0005515
Amo13g0851 631 SMART arm_5 177 218 IPR000225 GO:0005515
Amo13g0851 631 SMART arm_5 398 438 IPR000225 GO:0005515
Amo13g0851 631 SMART arm_5 219 259 IPR000225 GO:0005515
Amo13g0851 631 Gene3D - 370 608 IPR011989 -
Amo13g0851 631 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Amo13g0851 631 Gene3D - 141 302 IPR011989 -
Amo13g0851 631 MobiDBLite consensus disorder prediction 335 374 - -
Amo13g0851 631 PANTHER ARMADILLO REPEAT ONLY 4 1 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0851 Amo-Chr13 10609230 10611367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0851 152 295 U-box Gene Family AT1G23030 26.389 6.54e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0851 - - gmx:100807066 894.034