Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0850 ATGGCTTCACTATATGAGGTGCTTGGGATTTCAATGGGAGCAAGCGGGCATGAGATAAAAGCTGCATACAGAAAGCTAGCAAGAACATGCCACCCTGATGTTGTGGCCATGAATCAGAAGGAAAGCTCGGCCAACATGTTCATCAAGATCCATTCAGCTTATTCAACACTTTCAGACCCAGATAAGAGAGCTAAGTATGATAGAGAAACTTATGGACACAAGATCATGATGAGATCTTCATCAAACATGGCTACTTCAGCTTCTATGTCTGCAACATACCAATCATTTTCTCAACAAGGGAGGAAGTGGGAAACAGATCAATGTTGGTAG 330 0.4242 MASLYEVLGISMGASGHEIKAAYRKLARTCHPDVVAMNQKESSANMFIKIHSAYSTLSDPDKRAKYDRETYGHKIMMRSSSNMATSASMSATYQSFSQQGRKWETDQCW* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0850 109 PRINTS DnaJ domain signature 5 23 IPR001623 -
Amo13g0850 109 PRINTS DnaJ domain signature 23 38 IPR001623 -
Amo13g0850 109 PRINTS DnaJ domain signature 42 62 IPR001623 -
Amo13g0850 109 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Amo13g0850 109 SMART dnaj_3 2 62 IPR001623 -
Amo13g0850 109 Gene3D DnaJ domain 1 103 IPR036869 -
Amo13g0850 109 SUPERFAMILY Chaperone J-domain 2 73 IPR036869 -
Amo13g0850 109 Pfam DnaJ domain 4 67 IPR001623 -
Amo13g0850 109 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 2 109 - -
Amo13g0850 109 CDD DnaJ 5 59 IPR001623 -
Amo13g0850 109 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 2 109 - -
Amo13g0850 109 ProSiteProfiles dnaJ domain profile. 3 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0850 Amo-Chr13 10594052 10595437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0850 5 67 C2H2 Transcription Factor Family AT1G74250 44.776 2.50e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0850 - - adu:107477115 205.297