Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0844 ATGCATTCTCCTCTACATGAATTAGAAAAGCTTCTACTTTTGCTCTCAGACGATGATGTTCGAGTTCGAGTTGTAGGGATTTGTGGAATGGGCGGCATAGGAAAGTCAACTCTTGCCACCATTTTATATGGAAAAATCTCTCATCAATATGATTCTTCATGTTTTGTGGATGACGTAAGTAGAATTTACGGAGATTATGGTCCACTTGGTGTACAAAAGCAACTTCTTTGTCAAGCTTTCATGCAAGAAAATTTTTCGATATGCAATCTTTCACTGGCAAATAATCTGATTCAAACTAGGTTATGCCATAGAAAGGTTCTCCTAGTTCTTGATAATGTTGATGAGGGGATTCAATTGGAGAAGTTGGCTATAAAACGGGAAAGGCTAGGTAGAGGGAGTAGAATAATCATAGTTTCTAGAGATGAGCATATATTGAGAGAGTATGGAGCGGATGAAGTTTTCAAAGTTCCGCTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGCAGAAAAGCTTTCAAATGTAATCACGTTGCAAAAGATTACGAGAGCCTGACAGATTCTGCATTAAAATATGCTAATGGACTTCCTTTAGCGATTAAAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTCTCCGAATGGAGTAGTGCATTAATTAGATTGAAAGAAAAGCCAACAAAAGATATTATGGATGTGCTACGAATCAGTTTTGATGCACTTGACGATATGGAAAAGGAAATATTTCTTGATATTGCTTGTTTCTTTCCATTTAAGCGCGAAGAATATGTGAAAGAGATTTTACGTATTCGAGGATTTTATCCTGATATTGGTATAAGAATTCTCATTGATAAATCACTTATAACTATTTTTGATGGATGGGAGATAGTTATGCACGATCTGTTGAGAGAGTTGGGTAGAAGTATTGTTCGAGAAAAATCACCCCACGAACCAAGAAAGTGGAGCAGGTTGTGGAATCAAAAGGATCTAAGCAATGTCTTACGAGAAAACAAGATAGCAGAAAACCTTGAAGCCATAGTTCTCCGAGAATTTTGTATCTACAGGGAAGAGTTGCCAGTTGAAGCTTTATCACAAATGAGTAACCTGAAATTGCTTATTATACTTAGTCTTACTGAAAATTTGAGTTTCTCAGGATGCCTGCATTTTCTTTCTAATGAGTTGGGATATCTTGAATGGGAAAGTTATCCTTTCACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAACTAATCCTGGATTATAGCAACATCAAAGAACTCTGGAAGGGAATAAAGGATCTACCTAATTTGACACATATAGCACTAAGAGGTTCTCATAATCTTGTAAAGATACCAAACTTATCTCAGGCCCCAAATCTTGAGGAACTAAATCTTGAAGGATGTGTTAAACTTGTTCACCTTGATCCATCTGTTGGTTCTCTACAAAAACTTCGTTTCTTGAATCTGAAATGGTGCAAAAGCCTTGTAAAGATACCCATCTTAGCTCGGACTCCAAATCTTGAGGCAATAAATCTTGAAGGATGTGTTAAACTTGTTCACCTTGATCCATCTGTTGGTTCTCTAGAAAAACTTCGTTTCTTGAATCTGGAATGCTGCAAAAGCCTTGTAAAGATACCCATCTTTTCTCGGACTCCAAATCTTGAGATGTTAAATCTTGGAGGATGTGATAAACTTGTTCACCTTGATGCATCTATTGGTTCTCTAGAAAAACTTCGTTTCATGAATTTGGAAAACTGCAAAAATCTTGTTAGTATTCCCAATAGCATATTTCATCTTAATTCTCTTCAAGATTTAAATCTTTCTGGGTGTTCGAAATTATTTAAATATCAGTTGTTAGAGAATCCAAGACAGAGCGAGCAGTTGAATACAGGTCAAAGTGTGCAAAGCCACATGACATCATCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTATCTTCTAGAAGGCGTTCGAATTCAGTTGGTTCATTGGTGCCTTCTTTGTCTCGTTTCCCAGTTTTGACATCTCTTGACATAAGTTTCTGTAATCTAGTTCAAATCCCTGAAGCTATTGGACAGTTACATTGTTTAGAAGATTTAAATATAGGGGGAAACAATATTGTTGCGCTACCTCATTGCATCAAGGAACTTCCCAAGCTAAGGAAGTTGAACTTGGAGTACTGTAAGCATCTAAAGTGGTTGCCAAGTACACTTTTGCCGATCAGAAGAGATTGCTATGGAGGAATATATGTTTTCAACTGCCCAAATTTGAGTGACACGGAAGGTTGTCGTGTGACAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACTTGCAATGCTCTTTCCCCAAATACAGCATTAGAGCTGTTGTTCCAGGAACTAAAATTCCAAGGTGGTTCAGCGAACAGAATGCGGGTAGTTCAATATGGCTGGATCCGTCTCCCATTCTAGATGACAACAATTGTATTGGCATTGCTGTTTGTGGAACATTTGTTGCACATCATGCTTCACCTCAATTTGTTCGACGAGTGACAGGATCTCTTTTACATTGTCATTTTCATCGAAGTTGCTATCGGGGGGGCGTTTATTACATTGTTCCAATACGGTTTAAGCAGGATTTGATCACAACTGAATTGGATCATATGTTGCTAATGTTTTGCTCCCGGGAAAATATCATTCATTATTTTTCAGAGGTTTTAAAAGAAGGGCCATGTTATCGTGATGGTAATGAATTGGCCATCGAAAGTGATTATCCAGAAGTAGTAGAAGTGAAGAGTGTTGGTTATCGTTGGGTATTCAAGGAAGATGTGGAACAATTTAACCCAACAATGATGTACGGAGCCAATTCTTCATCTCGTCACAATCAGAAGCACAAGTTTTTGGCAATTCAAGATGAGCAATTAATGTAG 2922 0.3747 MHSPLHELEKLLLLLSDDDVRVRVVGICGMGGIGKSTLATILYGKISHQYDSSCFVDDVSRIYGDYGPLGVQKQLLCQAFMQENFSICNLSLANNLIQTRLCHRKVLLVLDNVDEGIQLEKLAIKRERLGRGSRIIIVSRDEHILREYGADEVFKVPLLNDENALQLFCRKAFKCNHVAKDYESLTDSALKYANGLPLAIKVLGSFLFGRDVSEWSSALIRLKEKPTKDIMDVLRISFDALDDMEKEIFLDIACFFPFKREEYVKEILRIRGFYPDIGIRILIDKSLITIFDGWEIVMHDLLRELGRSIVREKSPHEPRKWSRLWNQKDLSNVLRENKIAENLEAIVLREFCIYREELPVEALSQMSNLKLLIILSLTENLSFSGCLHFLSNELGYLEWESYPFTCLPSSFQPNKLVKLILDYSNIKELWKGIKDLPNLTHIALRGSHNLVKIPNLSQAPNLEELNLEGCVKLVHLDPSVGSLQKLRFLNLKWCKSLVKIPILARTPNLEAINLEGCVKLVHLDPSVGSLEKLRFLNLECCKSLVKIPIFSRTPNLEMLNLGGCDKLVHLDASIGSLEKLRFMNLENCKNLVSIPNSIFHLNSLQDLNLSGCSKLFKYQLLENPRQSEQLNTGQSVQSHMTSSICKTLTRPLHFLSSRRRSNSVGSLVPSLSRFPVLTSLDISFCNLVQIPEAIGQLHCLEDLNIGGNNIVALPHCIKELPKLRKLNLEYCKHLKWLPSTLLPIRRDCYGGIYVFNCPNLSDTEGCRVTVISWMIKMIQVNLQCSFPKYSIRAVVPGTKIPRWFSEQNAGSSIWLDPSPILDDNNCIGIAVCGTFVAHHASPQFVRRVTGSLLHCHFHRSCYRGGVYYIVPIRFKQDLITTELDHMLLMFCSRENIIHYFSEVLKEGPCYRDGNELAIESDYPEVVEVKSVGYRWVFKEDVEQFNPTMMYGANSSSRHNQKHKFLAIQDEQLM* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0844 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 252 IPR027417 -
Amo13g0844 973 Gene3D - 158 242 IPR042197 -
Amo13g0844 973 Pfam Leucine rich repeat 676 731 IPR001611 GO:0005515
Amo13g0844 973 SUPERFAMILY L domain-like 297 736 - -
Amo13g0844 973 Gene3D Ribonuclease Inhibitor 502 632 IPR032675 -
Amo13g0844 973 PRINTS Disease resistance protein signature 100 114 - -
Amo13g0844 973 PRINTS Disease resistance protein signature 24 39 - -
Amo13g0844 973 PRINTS Disease resistance protein signature 193 207 - -
Amo13g0844 973 PRINTS Disease resistance protein signature 599 615 - -
Amo13g0844 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 494 548 IPR044974 GO:0006952
Amo13g0844 973 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 494 548 - -
Amo13g0844 973 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 4 501 - -
Amo13g0844 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 501 IPR044974 GO:0006952
Amo13g0844 973 Pfam C-JID domain 795 942 IPR045344 -
Amo13g0844 973 Gene3D - 2 152 IPR027417 -
Amo13g0844 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 541 945 IPR044974 GO:0006952
Amo13g0844 973 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 541 945 - -
Amo13g0844 973 Gene3D Ribonuclease Inhibitor 637 761 IPR032675 -
Amo13g0844 973 Gene3D Ribonuclease Inhibitor 326 501 IPR032675 -
Amo13g0844 973 Pfam NB-ARC domain 9 228 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0844 Amo-Chr13 10561917 10570765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0844 1 630 WRKY Transcription Factor Family AT5G45050 33.945 4.94e-91 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0844 - - aip:107628789 1946.01