Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0843 ATGGATTGCATGAGAATCCAAACCCCCTTGTCTCTTAAGAAGAATTGGAAATATGATGTGTTTGTGAGTTTCAGAGGCGAGACTCGCTACAACTTCACCGATCAACTTTTTTATGCTCTCCACAGATACAGCATAGTTACCTTCAGGGATGATACTAAGCTCGAGAAAGGAGGACTTATATCTGCGGGGCTTCTGGAAGCTATTGAAGCATCACAGGTCCTGATTGTTGTGTTCTCTATCAACTATGCTTCCTCCACATGGTGCTTGCAAGAACTGGCAAAGATAGCTGATTGTATTGAAATACCGGGACAGCGTGTTCTGCCTGTTTTCTATGATGTGAGTCCGACTGAGGTGAGAAGGCAAAGTGGAAATTATGAAAAAGCCTTTATGAAACATGAAGAAAGATTCAAAGATGATGCAGARATGACGGAGCAAGTGCGAAGATGGAGGGCAGMTCTAACACAAGTAGCCAATCTCTCTGGCTGGGATATGAGGAATAAGTCACAATCTGCTAAGATTGAGGAACTCGTGAAAGCGGTAACAAGTATATTGAGTCCCAAACCATCATCAAGTCTATCTAATGATATAGTTGGGATGCAATCCCCTTTAGAAGAACTCAAAAAGATTCTAGCTTTAGGCTTGGATGATGATGTTCGTGTGGTAGGGATTTGTGGAATGGGTGGTATAGGAAAGTCAACTCTTRCCACCATTTTATATGAAGCAATCTCTCATCAATATGATGTTTCATGTTTTGTAGATGATGTAAGCGAAACATACAGACATTATGGTCCACTTGGTGTACAAAAGCAACTTCTTTGTCAAGCTTTCAAGGAAGAAGATTTTCTTATATGCAATCTTTCGTTGGCAAATAATCTTATTCAAACTAGGTTACGCCATAGGAAGGTTTTCATAGTTCTAGATAATGTTGAAAAAGGAATTCAGTTGGAGAAGTTGGCTATAAAACGAGAATGGCTAGGTCCAGGGAGTAGAATAATTATAGTTTCTAGAGATGAACATATATTGAGAGAGTATGGAGTGGATGGAGTTTATAAAGTTCAACTCTTAAATGATGAGAATGCTCTGCAATTGTTTTGTAGAAAAGCTTTCAAATGTAATCATGTTGCACAAGATTACAGACGTTTGACAACTTCTGCATTAACATATGCTAGTGGACTCCCGTTAGCAATTAGAGTGTTGGGCTCATTTTTGTTTGGGCGAAATGTGTCTGAGTGGAGTAGTGCATTAGTTAGACTAAAAGAAAAACCAACAAAAGACATTCTAGATGTGCTTAGAATCAGCTATGATGGACTTGAGGAGATGGAAAAGGAGATATTTCTTGATATTGCATGTTTCTTTCCCTCTGGGAATGGAAAATGGGATGTAGAAGATATTTTAAGTATTCGAGGATTTCAACCTGATATTGGTTTAAGAATTCTCATTGATAAGTCACTCATAACTTATAAGTGGGACGATATTATCAATATGCATGATTTGTTGAGAGATTTGGGTAGAAGTATTGTTCGAGAAAAATCGCCCAAAGAACCAAGAAAGTGGAGTAGGTTATGGAATCAAAAGGATCTAAGTGATGTCTTGCGGGAAAACAAGGCAGCAAAAAACCTTGAAGCCATAGTTCTGCCAAGATTTCATCCAAATAGAGAAGAGATGTCAGAAAGGACAACACTGAGGGTTGAAGCTTTATCACAAATGAGGCACCTTCAATTACTCATCCTCCGAGAAGTGAATTTCTTAGGATGTCTTAATTTTCTTTCTAATGAGTTGGGGTATGTTGATTGGGAAGACTATCCTTTTACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAATTAATCCTACATTATAGCAACATCAAAGAACTATGGGAGGGAATAAAGGATCTCCATAATTTGACATATCTGGAACTATGTCATTCCAAAAATCTTGTAAAGATACCAAATTTATCTCAGGCCCCAAATCTTKMGYACATAAATCTTAMAGGATGTGTGAAACTTGTTCACCTTGATGCATCTATTGGTTCTCTGGAAAAGCTTCTTTATTTGAATCTAGAAAACTGTAAAAATCTTGTGAGTATTCCCAACAGCATATTTCATCTTAATTCTCTTCAYGATTTAAACCTATCTGGGTGTTGGAAATTACTTAAATATCAGTTGTTAGAGAAACCAAGACAAAGCAAGCAGTTGAATACAGGTCAAAGTGTGCAAAGCCATATGACARCCTCCATATGCAAAACTTTTACAAGGCCTCTCAACTTTTTGTCTTCTAGAAGGCGCTCCAATTCAGTTGGTTTGTTGGTGCCTACTTTGTCCCGTTTCCCAGCTTTGATATATCTTGACATAAGTTTCTGTAATCTAGTTGAAATCCCTGATGCTATTGGACAGTTACGTTGTTTACAATATTTAAACATAGGGGGCAACAATTTTGTTACGCCACCTAATTGCATCAAGGAACTTCCCAAGCTAACTTGGTTGAACTTGGAGTACTGTAAGCATCTAAAGTGGTTGCCTAGTACCCTTTTGCCGATAGGAAAGAGGACTGGAGGAGCAATATATGTTTTCAACTGCCCGAATTTGAGTGACACTGAAGGTTGTCGTGTCACAGTCATTTCATGGATGATAAAAATGATTCAGGTGGACCTGCCATACAGAATTGAAGCTGTTGTTCCAGGAACTAAAATTCCAAGCTGGTTCAGCGAGCAGAATACGGGTGATTCAGTGATCTTGGATCCATCTCTCATTGTGGGTGACAATAATTGGATTGGCATTGCTTGTTGTGTAACATTTGTTGTGCATGATACTCCAACTCAATTGCTTGAAGAAGCTGTATATCCTCCCGCTCTAATTAGTTGGGGTTTTCGTCGTAAAGGGTATGATGGGGGCATTTATCCCCAAGTTCCAATACGTCTTAAGAACGATTTGATCACAACTGAATTAGATCATATGTTTCTAATATTTTTATCCCGGGAAGCTTTCATTGATGAGTTTCCAGAAGAAGGACCATCTGATTATGGTATTGTATTGGCCAGCAGGAGTGATTATCCAGAAGAATTAGTAGAATTGAAGAGGTGTGGTTACCGTTGGGTATTTAAGGAAGATGTGGAACAATTTAACCCAACAATGATGTTTACCGCCAATTCTTCACCTCAGAGTCCCAACCACAAGTTTCTGCCAATTCAAGATCACCAATAA 3210 0.3841 MDCMRIQTPLSLKKNWKYDVFVSFRGETRYNFTDQLFYALHRYSIVTFRDDTKLEKGGLISAGLLEAIEASQVLIVVFSINYASSTWCLQELAKIADCIEIPGQRVLPVFYDVSPTEVRRQSGNYEKAFMKHEERFKDDAEMTEQVRRWRAXLTQVANLSGWDMRNKSQSAKIEELVKAVTSILSPKPSSSLSNDIVGMQSPLEELKKILALGLDDDVRVVGICGMGGIGKSTLXTILYEAISHQYDVSCFVDDVSETYRHYGPLGVQKQLLCQAFKEEDFLICNLSLANNLIQTRLRHRKVFIVLDNVEKGIQLEKLAIKREWLGPGSRIIIVSRDEHILREYGVDGVYKVQLLNDENALQLFCRKAFKCNHVAQDYRRLTTSALTYASGLPLAIRVLGSFLFGRNVSEWSSALVRLKEKPTKDILDVLRISYDGLEEMEKEIFLDIACFFPSGNGKWDVEDILSIRGFQPDIGLRILIDKSLITYKWDDIINMHDLLRDLGRSIVREKSPKEPRKWSRLWNQKDLSDVLRENKAAKNLEAIVLPRFHPNREEMSERTTLRVEALSQMRHLQLLILREVNFLGCLNFLSNELGYVDWEDYPFTCLPSSFQPNKLVKLILHYSNIKELWEGIKDLHNLTYLELCHSKNLVKIPNLSQAPNLXXINLXGCVKLVHLDASIGSLEKLLYLNLENCKNLVSIPNSIFHLNSLHDLNLSGCWKLLKYQLLEKPRQSKQLNTGQSVQSHMTXSICKTFTRPLNFLSSRRRSNSVGLLVPTLSRFPALIYLDISFCNLVEIPDAIGQLRCLQYLNIGGNNFVTPPNCIKELPKLTWLNLEYCKHLKWLPSTLLPIGKRTGGAIYVFNCPNLSDTEGCRVTVISWMIKMIQVDLPYRIEAVVPGTKIPSWFSEQNTGDSVILDPSLIVGDNNWIGIACCVTFVVHDTPTQLLEEAVYPPALISWGFRRKGYDGGIYPQVPIRLKNDLITTELDHMFLIFLSREAFIDEFPEEGPSDYGIVLASRSDYPEELVELKRCGYRWVFKEDVEQFNPTMMFTANSSPQSPNHKFLPIQDHQ* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0843 1069 Pfam C-JID domain 895 1041 IPR045344 -
Amo13g0843 1069 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 959 IPR044974 GO:0006952
Amo13g0843 1069 Pfam Leucine Rich Repeat 614 633 IPR011713 -
Amo13g0843 1069 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Amo13g0843 1069 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 959 - -
Amo13g0843 1069 Gene3D - 187 346 IPR027417 -
Amo13g0843 1069 SUPERFAMILY L domain-like 495 846 - -
Amo13g0843 1069 MobiDBLite consensus disorder prediction 1048 1063 - -
Amo13g0843 1069 Pfam NB-ARC domain 202 426 IPR002182 GO:0043531
Amo13g0843 1069 Pfam TIR domain 17 193 IPR000157 GO:0007165
Amo13g0843 1069 SMART till_3 17 159 IPR000157 GO:0007165
Amo13g0843 1069 PRINTS Disease resistance protein signature 680 696 - -
Amo13g0843 1069 PRINTS Disease resistance protein signature 296 310 - -
Amo13g0843 1069 PRINTS Disease resistance protein signature 220 235 - -
Amo13g0843 1069 PRINTS Disease resistance protein signature 389 403 - -
Amo13g0843 1069 Gene3D - 12 186 IPR035897 -
Amo13g0843 1069 Gene3D Ribonuclease Inhibitor 745 877 IPR032675 -
Amo13g0843 1069 Gene3D - 354 438 IPR042197 -
Amo13g0843 1069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 448 IPR027417 -
Amo13g0843 1069 Gene3D Ribonuclease Inhibitor 538 744 IPR032675 -
Amo13g0843 1069 Pfam Leucine rich repeat 782 836 IPR001611 GO:0005515
Amo13g0843 1069 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Amo13g0843 1069 MobiDBLite consensus disorder prediction 1048 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0843 Amo-Chr13 10545655 10549436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0843 65 831 WRKY Transcription Factor Family AT4G12020 29.554 1.47e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0843 - - adu:107476580 1259.97