Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0841 ATGGATTGCATGAGAATCCAAAGCCCCTTGTCTGTTGAGAAGAATTGGAAATATGATGTGTTTGTGAGTTTTAGAGGGGAGACTCGCTTCAATTTCACCGATCATCTTTATGCTGCTCTCCGCAGACACGGCATGGTTGCCTTCAGGGATGATACTAGGCTCCAGAAAGGAGGACCTATATCAGCAGGGCTTCTGGAAGCTATTGAAGGATCACAGGTTCTGATTGTTGTCTTCTCTATGAACTATGCTTCTTCCACATGGTGCTTGCAAGAACTGGCAAAGATAGCTGATTACATGAACATACCGGGACAGCGTGTTCTGCCTGTTTTTTGTGATGTGAGTCCATCTGAGGTGAGAAAGCAAAGTGGAAATTACGAAAAAGCCTTTGAGGAACACGAAGAAAGATTCAAAGAAGATGCAGAGATGATGGAGCAAGTGCGAAGATGGAGGGCAGCTCTAACACAAGTAGCCAGTCTCTCTGGCTGGGATCTCAAGGATAAGTCACAATCTGCTGAGATTGAAAATATTGTGAAAATGGTAACAAGCATAGTGAGTCCCAAACCATCATCAAATCTATCTGATGATATAGTTGGGATGCATTCTCCTCTACAAGAGTTAGAAAAGCTTCTACTTTTGGACTCAGAGGATGATGTTCGAGTTTTAGGAATTTGTGGAATGGGCGGCATAGGAAAGTCAACTCTTGCCACCATTTTATATGAAAAATTCTCTCATCAATATGATGCTTCATGTTTTGTGGATGATGTAAGTAGAATTTACGGAGGTTATGGTGCAGTTGGTGTACAAAACCAACTTCTTTGTCAAGCTTTCATGGAAGAAAATTTTTCAACATTCAATCTTTCATTGGCAAATAATCTGATTCAAACTAGGTTACGGCATAGAAAGGTTCTGATAGTTCTTGATAATGTTGATGAGGGGATTCAATTGGAGAAGTTGGCTATAAAACGGGAAAGGCTAGGTAGAGGGAGTAGATTAATCATAGTTTCTAGAGATGAGCATATATTGAGAGAGTATGGAGCGGATGAAGTTTTCAAAGTTCGCTCTTAA 1065 0.4075 MDCMRIQSPLSVEKNWKYDVFVSFRGETRFNFTDHLYAALRRHGMVAFRDDTRLQKGGPISAGLLEAIEGSQVLIVVFSMNYASSTWCLQELAKIADYMNIPGQRVLPVFCDVSPSEVRKQSGNYEKAFEEHEERFKEDAEMMEQVRRWRAALTQVASLSGWDLKDKSQSAEIENIVKMVTSIVSPKPSSNLSDDIVGMHSPLQELEKLLLLDSEDDVRVLGICGMGGIGKSTLATILYEKFSHQYDASCFVDDVSRIYGGYGAVGVQNQLLCQAFMEENFSTFNLSLANNLIQTRLRHRKVLIVLDNVDEGIQLEKLAIKRERLGRGSRLIIVSRDEHILREYGADEVFKVRS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0841 354 Pfam NB-ARC domain 212 353 IPR002182 GO:0043531
Amo13g0841 354 SMART till_3 17 159 IPR000157 GO:0007165
Amo13g0841 354 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Amo13g0841 354 Pfam TIR domain 17 190 IPR000157 GO:0007165
Amo13g0841 354 PANTHER TMV RESISTANCE PROTEIN N-LIKE 13 204 - -
Amo13g0841 354 PRINTS Disease resistance protein signature 296 310 - -
Amo13g0841 354 PRINTS Disease resistance protein signature 220 235 - -
Amo13g0841 354 Gene3D - 10 182 IPR035897 -
Amo13g0841 354 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 13 204 - -
Amo13g0841 354 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 162 IPR035897 -
Amo13g0841 354 Gene3D - 183 351 IPR027417 -
Amo13g0841 354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 352 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0841 Amo-Chr13 10474575 10475826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0841 18 353 WRKY Transcription Factor Family AT4G12020 25.444 2.34e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0841 - - aip:107628789 598.971