Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0840 ATGAGTTGGAAGGATCTACCTAATTTGACACATATAGCACTATGTGATTCTCATAATCTTGTAAAGATACCAAACTTATCTCAGGCCCCAAATCTTGAGGAACTAAATCTTGAAGGATGTGTTAAACTTGTTCACCTTCATCCATCTGTTGGTTCTCTACAAAAGCTTCATTCCTTAAATCTGGAAAACTGCAAAAGCCTTGTAAAGATACCCATCTTATCTCGGACTTCAAATCTTAAGAAGCTAAAACTTGCAGGATGTGATAAACTTGTTCATCTTGATGCATCTATTGGTTCTCTAGAAAAGCTTCGTTTCTTGAATCTGGAAAACTGCAAAAACCTTTTGTTAGAGAAACCAAGACAGAGCGAGCAGTTGAATTCAGGTCAAAGTGTGCAAAGCCACATGACGTCATCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTATCTTCTAGAAGGTGTTCGAATTCAGTTGGTTCATTGGTGCCTTCTTTGTCTCGTTTCCCAGTTTTGACATCTCTTGACATAAGTTTCTGTAATCTAGTTCAAATCCCTGAAGCTATTGGACAGTTACATTGTTTAGAATATTTAAATATCGGGGGAAACAATATTGTTGCGCTACCTCATTGCATCAAGGAACTTCCCAAGCTAAGGGTGTTGAACTTGGAGTACTGTAAGCATCTAAAGTGGTTGCCAAGTACACTTTTGCCGATCAGAAGAGTATCTTATGGAGGAATATATGTTTTCAACTGCCCAAATTTGAGTGACACGGAAGGTTGTCGTGTGACAGTTATTTCATGGATGATAAGAATGATTCAGGTGAACTTGCAATGCTCTTTCCCCAAATACAGCATTAGAGCTGTTGTTCCAGGAACTAAAATTCCAAGGTGGTTCAGCGAACAGAATGCGGGTAGTTCAATATGGCTGGATCCGTCTCCCATTCTAGATGACAACAATTGTATTGGCATTGCTGTTTGTGGAACATTTGTTGCACATCATGCTTCACCTCAATTTGTTCGACGAGTGACAGGATCTCTTTTAGAATGTCGTTTTCATCGAAGTCGCTATGAGACCGGTCGTTACAATGTTCCAATATGGTTTAAGCAAGATTTGATCACAACTGAATTGGATCATATGTTGCTAATGTTTCTATCCCACCAATATATTAAATCGGGTTCAAAAGAAGGAACATATTATCCTGAATTGGCCATCGAAAGTGATTATCCAGAAGTAGTAGAAGTGAAGAGTGTTGGTTATCGTTGGGTATTAAAGGAAGATGTGGAACAATTTAACCCAACAATGATGTACAGAGCCAATTCTTCATCTCGTCACAATCAGAAGCACAAGTTTTTGGCAATTCAAGATGAGCAATTAATGTAG 1383 0.3854 MSWKDLPNLTHIALCDSHNLVKIPNLSQAPNLEELNLEGCVKLVHLHPSVGSLQKLHSLNLENCKSLVKIPILSRTSNLKKLKLAGCDKLVHLDASIGSLEKLRFLNLENCKNLLLEKPRQSEQLNSGQSVQSHMTSSICKTLTRPLHFLSSRRCSNSVGSLVPSLSRFPVLTSLDISFCNLVQIPEAIGQLHCLEYLNIGGNNIVALPHCIKELPKLRVLNLEYCKHLKWLPSTLLPIRRVSYGGIYVFNCPNLSDTEGCRVTVISWMIRMIQVNLQCSFPKYSIRAVVPGTKIPRWFSEQNAGSSIWLDPSPILDDNNCIGIAVCGTFVAHHASPQFVRRVTGSLLECRFHRSRYETGRYNVPIWFKQDLITTELDHMLLMFLSHQYIKSGSKEGTYYPELAIESDYPEVVEVKSVGYRWVLKEDVEQFNPTMMYRANSSSRHNQKHKFLAIQDEQLM* 461
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0840 460 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 4 65 - -
Amo13g0840 460 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 49 236 - -
Amo13g0840 460 Pfam Leucine rich repeat 171 226 IPR001611 GO:0005515
Amo13g0840 460 Gene3D Ribonuclease Inhibitor 147 287 IPR032675 -
Amo13g0840 460 Gene3D Ribonuclease Inhibitor 1 138 IPR032675 -
Amo13g0840 460 SUPERFAMILY RNI-like 3 233 - -
Amo13g0840 460 Pfam C-JID domain 290 429 IPR045344 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo13g0840 Amo-Chr13 10469691 10471291 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0840 6 240 WRKY Transcription Factor Family AT4G12020 27.572 2.81e-08 54.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0840 - - aip:107628789 691.804