Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0838 ATGGGCTTTCACTTACCAGCTATTAGAAGAGCATCATCTGCTGTTAGCCAAGAATCTTCCAAAGCTGTGGAACTTCCGAAAGGCTATTTCGCAGTCTATGTTGGAGACAAAATGAAGCGGTTTGTGATTCCAATTTCATATTTAAATCAACCTTTGTTTCAAGAGTTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGAGGTCTCACTATTCCTTGCAAAGAGGATGCTTTCATGGACCTCATCACTTCTCGCTTGAAGGGATTATAA 282 0.4007 MGFHLPAIRRASSAVSQESSKAVELPKGYFAVYVGDKMKRFVIPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCKEDAFMDLITSRLKGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0838 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 91 IPR003676 GO:0009733
Amo13g0838 93 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
Amo13g0838 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 7 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0838 Amo-Chr13 10454883 10455164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0838 24 86 Calmodulin-binding Proteins AT3G43120 52.381 3.30e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0838 K14488 - gmx:100806671 157.147