Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0837 ATGGCTATTCGTTTGCCTTCTTCGGTGATCCATGCTAAACGTGTCCTCAGCCGGTCTCTTTCAGGTGGCAAAAAAGTGTCTGGAAATGTGCAAAAAGGGTATCTTGCAGTGTATGTTGGAGAAGAGGAGCAAAAGAAGAGATATATGGTTCCTATATCATACTTGCATGAACCTGCTTTTCAACAATTGCTAAGTGAAGCCGAGGAAGAATTCGGATTTAATCACTCAATGGGAGGTCTAACAATTCCTTGCAGTGAAGACATCTTTTGCAGTCAGGTTCATCATTCATTTCACGTGCTTTTCTTTCCACTGATATGCCAAAAGCATGCAACACCAAAAATGCAAAAGCGACTTGAATCAAGTGATTTGAGAAGAGTTGATGATTTGTTTAAGGTTTATTACAAGCAAAATGAACAGATTAATTTGAGAATCAAGTATGTGCTTGCTTCTTCTACAAGTAATTTGAGATCATTCCAAGAAGAAATCATGGGCTTCCATTTACTTGGTATCAGAAAATCTACACAAGTAACCTCAAAGAGTGGAGAAGTCCCAAAAGGGTATCTTGCAGAGTATGTGGGAGAAAACATGAAGAGGTTTGTGATTCCAATAGCATACTTGAGCCAACCTTCTTTTCAAGACTTGCTGAGTAAAGTAGAAGAAGAATTCGGATATGTTCATCCGATGGGTGGCCTCACAATTCCATGCAGAGAAGATATGTTCTTAGATATCATATCAGTTCAGGCTTAA 747 0.3896 MAIRLPSSVIHAKRVLSRSLSGGKKVSGNVQKGYLAVYVGEEEQKKRYMVPISYLHEPAFQQLLSEAEEEFGFNHSMGGLTIPCSEDIFCSQVHHSFHVLFFPLICQKHATPKMQKRLESSDLRRVDDLFKVYYKQNEQINLRIKYVLASSTSNLRSFQEEIMGFHLLGIRKSTQVTSKSGEVPKGYLAEYVGENMKRFVIPIAYLSQPSFQDLLSKVEEEFGYVHPMGGLTIPCREDMFLDIISVQA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0837 248 Pfam Auxin responsive protein 19 89 IPR003676 GO:0009733
Amo13g0837 248 Pfam Auxin responsive protein 174 245 IPR003676 GO:0009733
Amo13g0837 248 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 24 91 IPR003676 GO:0009733
Amo13g0837 248 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 175 246 IPR003676 GO:0009733
Amo13g0837 248 PANTHER SMALL AUXIN-UP RNA-RELATED 24 91 - -
Amo13g0837 248 PANTHER SMALL AUXIN-UP RNA-RELATED 175 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0837 Amo-Chr13 10451968 10453971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0837 29 89 Calmodulin-binding Proteins AT3G43120 52.459 1.67e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0837 K14488 - gmx:112997918 184.111