Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0835 ATGGGACCTATTAGGAGACAAGGGCATTTAAGAGGTCACATGGTGTTGTCTTCGGGGATTTTCTCAAACCTAAAGGCATCACTTTCTGCATCAAAAGGAACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTCGGATATGATCATCCAACCGGTGGTCTCACAATTCCATGCAGTGAGGGTGAGTTCTTAAGTCTCACTTCTCAGTTGGGTGGGCAATAA 312 0.4263 MGPIRRQGHLRGHMVLSSGIFSNLKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQELLNQAEEEFGYDHPTGGLTIPCSEGEFLSLTSQLGGQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0835 103 Pfam Auxin responsive protein 27 98 IPR003676 GO:0009733
Amo13g0835 103 PANTHER AUXIN-INDUCED PROTEIN 10A5 23 101 - -
Amo13g0835 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 23 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0835 Amo-Chr13 10437812 10438769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0835 11 93 Calmodulin-binding Proteins AT3G43120 43.158 4.22e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0835 K14488 - gmx:100786095 130.183