Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0832 ATGTATACAACAGCAAGTTTGATTCGATCATACCCTATTTTACAGCTTCATCTGAATTATTTCTTCAGGATAGCATCTATATATACACCACTTCTTGTGTTCTCAACCATCACAACTCATTTGCATCTCCACAACTATCAAAGCTCACATATTTCTCTGATACAAATCCTTCAACAACAATATATTACTTTTTCTTTTGAGCAACAAGAAACGATGGCTTTCCGCATTCCAGGTATTAGACGGGCCACATCTTTCTCTGCATCCAAGGGAACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTAGGAGATAAGATGAAGCGGTTTGTGATTCCGGTATCATACTTGAATCAGCCTTCATTTCAAGAATTACTGTGCCAGGCCGAAGAGGAATTCGGATATGATCATCCAACTGGTGGTTTGACAATTCCATGCAGTGAGGATGAGTTTCAAAACCTCACTTCTGAATTAAGTGGACAGTAA 483 0.3872 MYTTASLIRSYPILQLHLNYFFRIASIYTPLLVFSTITTHLHLHNYQSSHISLIQILQQQYITFSFEQQETMAFRIPGIRRATSFSASKGTNVPKGYLAVYVGDKMKRFVIPVSYLNQPSFQELLCQAEEEFGYDHPTGGLTIPCSEDEFQNLTSELSGQ* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0832 160 Pfam Auxin responsive protein 84 155 IPR003676 GO:0009733
Amo13g0832 160 PANTHER AUXIN-INDUCED PROTEIN 10A5 77 158 - -
Amo13g0832 160 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 77 158 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0832 Amo-Chr13 10425485 10426700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0832 92 153 Calmodulin-binding Proteins AT3G43120 54.839 6.70e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0832 K14488 - gmx:100782363 147.132