Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0831 ATGGGTTTTCTTTTGGCTGGTATCAGAAGAAAGACATCATTTACTGCAAACCAAGCAACTTCCAAAGTTGTGGAAGTCCCGAAAGGCTATCTTGCCATGTATGTTGGCGAGAAGATGAAGCGATTTGTGGTTCCCATTTCTTATTTGAATCAACCTTTATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGATGCTTTCTTGGACCTCACATCTCGCTTAAACTGA 276 0.4058 MGFLLAGIRRKTSFTANQATSKVVEVPKGYLAMYVGEKMKRFVVPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCSEDAFLDLTSRLN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0831 91 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Amo13g0831 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 91 IPR003676 GO:0009733
Amo13g0831 91 PANTHER AUXIN-INDUCED PROTEIN 6B 4 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0831 Amo-Chr13 10424141 10424716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0831 15 83 Calmodulin-binding Proteins AT3G43120 49.275 9.36e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0831 K14488 - gmx:100806671 158.303