Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0830 ATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAATCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTTGGATACGAACATCCAACTGGTGGTCTCAAAATTCCATGCAGTGAGGATGAATTCCTAAACCTCACTTTTCAAATGGTTGGGCAGTAA 267 0.4007 MAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQSSFQELLNQAEEEFGYEHPTGGLKIPCSEDEFLNLTFQMVGQ* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0830 88 Pfam Auxin responsive protein 12 81 IPR003676 GO:0009733
Amo13g0830 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 85 - -
Amo13g0830 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0830 Amo-Chr13 10423102 10423368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0830 20 78 Calmodulin-binding Proteins AT3G43120 55.932 9.15e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0830 K14488 - gmx:100782363 133.65