Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0828 ATGGGTTTCCGTTTACCTGTTATTCGAAGGGCATCATCATTCTCAGCTAGCGAAGCAGCTTCAAAATCTGTGGAACTCCCAAAAGGGTATCTTGCAGTGTATGTTGGAGAGAATCAAAAGCGTTTTGTGATCCCCGTATCATACTTGAACCAACCTTCATTCCAAGACTTGTTGAGTCAAGCTGAAGAAGAATTTGGATATGATCATCCCATGGGAGGTCTCACTATTCCTTGTAGTGAACATGTCTTCCAACGGATCACTTCTCGCTTGAATGGGCTATAA 282 0.4291 MGFRLPVIRRASSFSASEAASKSVELPKGYLAVYVGENQKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEHVFQRITSRLNGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0828 93 Pfam Auxin responsive protein 12 90 IPR003676 GO:0009733
Amo13g0828 93 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
Amo13g0828 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0828 Amo-Chr13 10420301 10420582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0828 25 84 Calmodulin-binding Proteins AT3G43120 53.333 7.90e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0828 K14488 - gmx:100816803 155.606