Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0819 ATGGCCGCTACTTCACTTTCAAACCTCTCTTCTTCTCTCTCATCAACCGCTGCCGCCACCACCACCACCACCGCGCTCTCCAAACCCTCCTCTCTCCCTCTCTTCCACAACAAAACCCTCCCTAAACCCACCGCCACCACGACAACACGCGCCGCCACATCCCACAACCACAACCCAATCCCCAAACCACAACAGCACCAACACTCGTCTCCCTTCTCCTTCTCCGATGACGACGAAAAGCCACGCGAAGAGTGCGGCGTCGTTGGAATCTACGGCGACCCCGAAGCCTCCCGCCTCTGCTACCTCGCACTCCACGCTCTACAGCACCGCGGCCAAGAAGGCGCCGGAATCGTAACCGTCAACAACAACGTCCTCCAATCCATCACCGGCGTCGGCCTCGTCTCCGACGTCTTCAACGAGTCCAAGCTCGACCAGCTCTCCGGCTCTCTCGCCATCGGCCATGTCCGTTACTCCACCGCCGGACAGTCCATGCTCAAGAACGTCCAGCCTTTCGTCGCCGGATACCGCTTTGGCTCCGTCGGCGTGGCTCACAATGGTAATCTCGTAAATTACCGAACCTTGAGGGCAAAACTGGAAGACAACGGTTCCATCTTCAACACAACGTCTGATACTGAGGTGGTTCTTCACCTCATCGCAACTTCGAAGCACCGACCTTTTATTCTGAGAATCGTTGACGCCTGTGAGAAGCTCGAAGGTGCGTATTCAATGGTGTTTGTTACAGAGGACAAGCTTGTTGCTGTTAGGGACCCGTTTGGATTTAGGCCTTTGGTTATGGGAAGAAGAAGCAACGGTTCTGTGGTTTTTGCTTCTGAAACTTGCGCTCTTGATTTGATTGAAGCTACTTACGAAAGAGAAGTGTACCCTGGCGAGGTTATTGTTGTGGACAACAATGGAATTCAGAGTCTCTGCCTCATGTCTCATCCGCAACCCAAACAGTGTATATTTGAGCATATTTACTTCGCTTTACCCAATTCTGTTGTTTTTGGTAGGTCAGTGTATGAATCTAGAAGGCAATTTGGTGAGATTCTTGCAACCGAGAGCCCTGTTGATTGTGATGTTGTGATAGCTGTGCCTGATTCTGGTGTTGTTGCGGCGCTTGGATACGCCGCGAAAGCCGGTGTCCCCTTCCAGCAGGGGCTAATTAGGTCCCACTATGTTGGGAGGACCTTTATTGAGCCTTCTCAGAAGATTAGGGACTTTGGCGTGAAGCTTAAGCTATCGCCGGTTCGCGCGGTTCTAGAAGGGAAGAGAGTTGTGGTGGTGGATGATTCAATTGTGAGAGGAACAACATCATCAAAGATTGTGAGGTTGTTGAAGGAGGCTGGTGCCAAAGAGGTTCACATGAGGATTGCAAGCCCACCAATCATTGGTTCTTGTTACTATGGTGTGGATACTCCAAGCTCTGAGGAGTTGATTTCTAATAGGATGAGCGTTGAGGAGATTAGGGATTTTATTGGTTCTGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAGGAATTTGTTGGGCCATGAGTCCCCAAAGTTCTGTTATGCTTGTTTCTCTGGGAAGTACCCTGTTGAGCCAAGAGAACTTAAGGTGAAGAGGGTTGGTGACTTTGTTGATGATGGGTTGAATGGGAGTTTGGAAACCATTGATGGTGGCTGGGTTCAGGCAACAACACCACCACAACCAACAAGAACTCCTAAAGAGGTTAAGGCTGCTGGTACTGTTTTTTGA 1740 0.5029 MAATSLSNLSSSLSSTAAATTTTTALSKPSSLPLFHNKTLPKPTATTTTRAATSHNHNPIPKPQQHQHSSPFSFSDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLSGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSMVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVIVVDNNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLRNLLGHESPKFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLETIDGGWVQATTPPQPTRTPKEVKAAGTVF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0819 579 MobiDBLite consensus disorder prediction 40 71 - -
Amo13g0819 579 Pfam Glutamine amidotransferase domain 163 282 IPR017932 -
Amo13g0819 579 CDD GPATase_N 85 335 IPR035584 -
Amo13g0819 579 Pfam Phosphoribosyl transferase domain 359 454 IPR000836 -
Amo13g0819 579 Gene3D - 344 508 IPR029057 -
Amo13g0819 579 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 85 304 IPR017932 -
Amo13g0819 579 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 51 557 - -
Amo13g0819 579 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 85 308 IPR029055 -
Amo13g0819 579 SUPERFAMILY PRTase-like 320 531 IPR029057 -
Amo13g0819 579 CDD PRTases_typeI 347 458 IPR000836 -
Amo13g0819 579 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 51 557 - -
Amo13g0819 579 TIGRFAM purF: amidophosphoribosyltransferase 85 526 IPR005854 GO:0004044|GO:0009113
Amo13g0819 579 MobiDBLite consensus disorder prediction 1 81 - -
Amo13g0819 579 Hamap Amidophosphoribosyltransferase [purF]. 84 525 IPR005854 GO:0004044|GO:0009113
Amo13g0819 579 MobiDBLite consensus disorder prediction 1 34 - -
Amo13g0819 579 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 85 526 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0819 Amo-Chr13 10235811 10237550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0819 70 558 PRT Gene Family AT2G16570 84.584 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0819 K00764 - gmx:100791919 931.013