Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0804 ATGGAGTTTTTTCTACACTCTACTTTTCAATCTTCAACCAACATTTTTATTTTCTTCTGTGTCTTGGCTTTCACTGTCTTCTTCATCTTTCGACTTCGCCGAAAGCTGCCATACCCACCAGGCCCAAAAGGGCTACCCATCATAGGAAACATGTTGATGATGGACCAACTTACCCATCGGGGCCTGGATAAGCTCGCCAAACAATACGGTGGGCTTGTTCATCTCCAAATGGGCTCCCTCCATATAGTGGCAATATCAACACCACAGATGGCCCGTGAGGTTCTCCAGGCCCAAGATAGCGCTTTCTCAAACCGGCCCGCAAATGTTGCAATTTCTTACTTGACATACGACCGGGCCGACATGGCTTTCGCAAACTACGGCCCGTTTTGGCGGCAGATGCGTAAGATCTGTGTAATGAAGCTTTTTAGTCGCAAGCGGGCCGAGTCATGGGCCTCGGTTCGTGAAGAAGTTGAAGAAACGGTTCGAAGCATATCAGCGAACGTTGGTTCAGCCATGAATTTGGGTGAATTGATTTTTGCTCTAACGAGGAGGGTCACCTATAAGGCCGCGTTTGGTGCGAGTTTAAATAAGGGGGAAGAGGAATTCATGGGAATCTTACAAGAGTTTTCAAAGCTTTTTGGAGCTTTTAACATTGCAGATTTCATTCCGTGGTTGGGTTGGTTGCATGCACAAGATTTTCACAAGAGAATGGTCAATGCACGAAAAGCACTTGATGTGTTTATTGATGAGATCATTGATGATCATATCAAAAAGAGGAACATCAACATGGGGAATGATAATGATGCAGATAAGGATATGGTTGATGAGCTTATGGATTTTCTTAATGAAGGTAGTGTTGGTGATGATGCTGTGAAGCCAAACAATTCACCATCAATCCTTAAGCTTACTAGAGACAATATCAAAGCTCTTATCATGGATGTCATGTTTGGAGGAACTGAGACAGTAGCATCAGTGATTGAATGGATTATGGCAGAGCTTTTGAGAAGCCCAATGGACCTTCACAAGGTCCAACAAGAGCTTGTTGATGTGGTGGGCTTGGACCGAAGGTTCAATGAATCGGATCTCGAAAAGTTGACTTTCCTCAAGTGCGTGGTCAAAGAAGCCTTGCGTCTCCACCCTCCAATTCCAATGGCTCTTCACGAGAGCGCAGAGGACAGCGTMATTGAGGGTTACGCAATCCCAAAGGGGACACGTGTCTGGATCAACGCGTGGTCTATAGGACGCGACAGCAGCGCGTGGGATGAGCCAGAGACATTCAATCCTTCAAGATTCTTGCGAGAAGCGGCACCCGATTTCAAAGGAAGCGATTTCGAGTTCATTCCATTTGGGTCGGGTCGAAGGTCATGCCCAGGGATGCAACTTGGGCTTTATACYGTGGAGTTAACSGTGGCYCATTTGCTTCATTGCTTCAATTGGGAGTTGCCCAATGGAATGAAGCCCGAGGATCTTGATATGAATGATACTTTTGGGCTCACAGCTCCAAGAGCAGTTCAACTTGTTGCGGTACCTACTTATCGTCTCAAGTGCCCCCTTTATTAA 1560 0.4603 MEFFLHSTFQSSTNIFIFFCVLAFTVFFIFRLRRKLPYPPGPKGLPIIGNMLMMDQLTHRGLDKLAKQYGGLVHLQMGSLHIVAISTPQMAREVLQAQDSAFSNRPANVAISYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVEETVRSISANVGSAMNLGELIFALTRRVTYKAAFGASLNKGEEEFMGILQEFSKLFGAFNIADFIPWLGWLHAQDFHKRMVNARKALDVFIDEIIDDHIKKRNINMGNDNDADKDMVDELMDFLNEGSVGDDAVKPNNSPSILKLTRDNIKALIMDVMFGGTETVASVIEWIMAELLRSPMDLHKVQQELVDVVGLDRRFNESDLEKLTFLKCVVKEALRLHPPIPMALHESAEDSVIEGYAIPKGTRVWINAWSIGRDSSAWDEPETFNPSRFLREAAPDFKGSDFEFIPFGSGRRSCPGMQLGLYTVELTVAHLLHCFNWELPNGMKPEDLDMNDTFGLTAPRAVQLVAVPTYRLKCPLY* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0804 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Amo13g0804 519 Pfam Cytochrome P450 39 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 Gene3D Cytochrome P450 31 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 SUPERFAMILY Cytochrome P450 39 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 9 518 - -
Amo13g0804 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0804 519 PANTHER CYTOCHROME P450 84A1-RELATED 9 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0804 Amo-Chr13 10033283 10036260 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0804 46 518 Monolignol Biosynthesis Gene Families AT4G36220 66.807 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0804 K09755 - zju:107426594 742.651