Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0783 ATGGGAGAGGTGGCGAGTGGCGGTGGTTGTTGCCCTCCGATGGATCTGTTCCGCTCGGAGCCGATGCAGCTTGTTCAGCTCATCATTCCCATCGAATCCGCTCATCGCACTGTCTCCTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATGCAGAGAAGAGCCCTTTTCAGCGGACTTATGCGACTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAGTTGCGTTTCTTCAAGGAGCAAATGTTGAAGGCTGGTGTTTCTCCAAAAAATTCCTTAGGACATGTTGATCTGAACATCGATGATCTTGATGTCAAACTTACAGACATTGAAGTCGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACTTACAATGAACTTGTGGAGTATAAGCTCGTGCTGCAGAAGGCTGGTGAGTTTTTCCAGTCAGCTCAGAGCCGCGCCATAGAGCAACAGAGAGAATATGAATCACACCAGTTGAGTGGGGAATCCATGGAAACACCTTTGTTGCAGGACCAAGAATTGCTGGGTGATTCAGGGAAGCCAGTTAAGTTGGGGTTTTTAGCTGGCCTTGTTCCCAGGGAGAAGTCCCAGGCATTTGAGAGAATTTTATTTCGTGCTACTAGAGGCAATGTGTTTCTGAGGCAGGCTGTTGTTGAGGATCCTGTCATAGATCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTTGTCTTCTATGCTGGTGAAAAAGCAAAAGCCAAGATTCTGAAAATATGTGATGCCTTTGGTGCTGATCGTTACCCTTTCGCTGAGGAACTTGGAAAACAAGCTCAAATGATTAAAGAGGTTTCAGGAAGACTTTCAGAATTGAAGACTACTATAGATGCTGGATCGCTGCACCGGGGAAGTTTGCTACAGACTATTGGTGCCCAATTTGAGCAATGGAACCTTTTGGTGAGGAAGGAAAAATCTGTTTACCATACCTTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAAGGGTGGAGTCCTATTTTTGCAACAAAGCAGATTCAAGATGCATTAGAGCGGGCAGCAATTGATTCTAACTCTCAAGTTGGTACTATTTTCCAAGTTTTGCAAACTAGGGAGATGCCACCTACATACTTTCGCACAAACAAGGTTACGTCTTCATTTCAAGGAATCATTGATTCATATGGGGTTGCTAAGTATCAGGAAGCGAATCCCACTGTGTATACTATAGTTACATTTCCATTTCTTTTTGCCGTAATGTTTGGTGATTGGGGTCATGGAATATGTTTGCTACTTGCAGCCCTTTATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGATATCACCGAAATGACTTTTGGAGGTCGATATGTTATTATGTTGATGGCACTCTTTTCAATCTACACTGGTTTGATCTATAATGAGTTCTTTTCTGTCCCATTTGAACTCTTTGGTCCCTCTGCTTATGCATGCCATGACCTTTCTTGCAGTGATGCTACGACATCAGGCCTGGTAAAAGTGCGCCACACTTACCCATTTGGTGTGGATCCTGTATGGCATGGTACCAGAAGTGAATTACCATTCCTAAACTCGTTGAAAATGAAAATGTCAATTCTTCTTGGGGTCGCTCAAATGAATCTTGGAATTATTATGAGCTATTGCAATGCCCTATTCTTTCGGAACAATGTAAATGTCTGGTTCCAATTTATTCCCCAGATGATATTTCTCAATGCTTTATTTGGCTATCTCTCCCTGCTTATTATTGTGAAGTGGTGCACTGGTTCTCAGGCTGATTTATACCATATAATGATCTACATGTTCCTGAGTCCAGCAGATGATTTGGGTGAAAACCAACTCTTTGTTGGTCAGAAATATTTGCAGATGACGCTTTTGCTTCTGGCTCTTGTTGCTGTGCCCTGGATGCTGCTCCCAAAACCATTTATTTTGAAGAGTCAACACCAAGCTAGGCATGGGGATGAATCATATACAGCACTTCAAACCACAGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCTCATGGTCATGAAGAGTTTGAGTTCAGTGAAGTCTTTGTGCATCAACTTATACACACCATAGAGTTTGTACTTGGAGCAGTCTCTAACACAGCTTCTTACCTTCGTCTATGGGCCCTTAGTCTTGCCCATTCAGAGTTATCAAGTGTATTCTATGAGAAAGTTCTAGTTCTGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGCATCGTTGTCTTTGTATTTGCTACTGTCGGAGTATTACTCGTCATGGAAACCCTGAGTGCCTTTTTGCATGCTCTAAGGCTTCATTGGGTGGAGTTCCAAAACAAATTCTATGAGGGTGATGGATACAAGTTCCACCCCTTCTCGTTTGCATTGCTAGATGAAGAGGAGGAGTGA 2463 0.43 MGEVASGGGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNAEKSPFQRTYATQIKRCGEMARKLRFFKEQMLKAGVSPKNSLGHVDLNIDDLDVKLTDIEVELTEMNANGEKLQRTYNELVEYKLVLQKAGEFFQSAQSRAIEQQREYESHQLSGESMETPLLQDQELLGDSGKPVKLGFLAGLVPREKSQAFERILFRATRGNVFLRQAVVEDPVIDPVSGEKTEKNVFVVFYAGEKAKAKILKICDAFGADRYPFAEELGKQAQMIKEVSGRLSELKTTIDAGSLHRGSLLQTIGAQFEQWNLLVRKEKSVYHTLNMLSLDVTKKCLVAEGWSPIFATKQIQDALERAAIDSNSQVGTIFQVLQTREMPPTYFRTNKVTSSFQGIIDSYGVAKYQEANPTVYTIVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVIMLMALFSIYTGLIYNEFFSVPFELFGPSAYACHDLSCSDATTSGLVKVRHTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNALFFRNNVNVWFQFIPQMIFLNALFGYLSLLIIVKWCTGSQADLYHIMIYMFLSPADDLGENQLFVGQKYLQMTLLLLALVAVPWMLLPKPFILKSQHQARHGDESYTALQTTEESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLVLAWGYNNVIILIVGIVVFVFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFALLDEEEE* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0783 820 Pfam V-type ATPase 116kDa subunit family 40 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo13g0783 820 Coils Coil 102 129 - -
Amo13g0783 820 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 820 - -
Amo13g0783 820 PIRSF ATP6V0A1 12 820 IPR026028 GO:0000220|GO:0046961
Amo13g0783 820 PANTHER VACUOLAR PROTON ATPASES 6 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0783 Amo-Chr13 9704955 9713627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0783 14 820 Primary Pumps ATPases(2) AT2G21410 76.980 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0783 K02154 - gmx:100810062 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0783 13 9704955 9713627 Amo13g0783 13 9704955 9713627 ECH