Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0721 ATGGTGGATCAGCGAAACATAGTATCGTTTATTCCCTTGTTCTTGTTGTTGTGGTTGAAGCTGTTTCATTTTGAGCTCACATTGGAGCAGCAGGTTCAGCAACTGAGTTCACCAGCTGAAAGAGCAGCACTGCTTCAACTTCGGTCCTCGCTCGGATTGAGGTCCAAGGAATGGCCAAGAAAGGCTGATCCTTGCTCAAACTGGATTGGTGTAAGGTGCCAGAATGGTAGAGTTGTTGGGATCAACATCTCTGGCTTTAGGAGAACCAGAATTGGTCGGCGAAATCCACAGTTTTCTGTAGAAGCCTTGGCCAATTTGACCCTCTTGCAGTCCTTCAATGCCTCCAATTTCCGGCTTCCCGGTCCTATCCCTGATTGGTTTGGCCAGAAGCTCCATTCACTTCGTGTGCTTGATCTTCGGTCTTGCTTCATSACCGGTGTTATTCCWCCTGGTGTTGGGAATTTAACCAACCTGACTAGCCTCTATCTGTCTGATAACAATCTAACTGGTGTGCTTCCTAATAGTCTTGGTCAACTCTCAGTACTTTCAGTTCTTGATCTCTCCAAGAATTTTATTAATGGATCCTTGCCAACATGGTTTMCATCTCTTGGGAATCTTTCTTCCCTTGACATCTCGGCTAATCATCTATCCGGWTCAATTCCCCCTGGCATTGGGACACTATCTAAGTTGCAATTCTTAGTGCTGAGACAGAACAATTTCACTGGTGCTTTACCTGTAGAGCTSTGGTCTCTGCCACAACTGAGCTTCCTCGATGTCTCCAGCAATAACTTCACTYGCCYGCTTCCAAATTCTAGTTCCATTGCTAATGCTACTGTTGGGCAGCTCAATATTTCCCATAACATGTTTTATGGAGGCCTTACTACTATWCTTAGAAGGTTTAGTTCTGTTGATCTGTCAGGCAATTATTTTGAAGGCAATGTTCTGGACTTCATGGTTAATGCATCTATAGGTAGGAATTGCCTCCGAAATGTGACAGGGCAGAGGACARTAGCAGAATGTGCATCATTTTATGCTGCAAGGGGCCTRGCTTTTGATAATTTTGGACGTCCGAATTCAACYGGAGATTCTGCAGGAAAGGCMTCCGGAATGAGCAATAAAACTAAAATTTTAATTGWAGCYATCTCAGGTGGGGTTGGTTTATTTGTGCTGCTGCTGTTACTCATTCTGCTTCTGCTATGCATTCGTAAGAGGGGTAATTCAAGTCAAAGGGGWAACGGCGTGGGTCCTGCRCCAGCTGGAGGCAGTCCTCCACATCCCGGTGCTGGTTCATCAATAAAGTTCTCYAGTGTAGGAGATTCATTTTCATATCATGAACTACTTCAGGCTACAAGTGATTTCAGTGATGCAAGTCTTATTAAACATGGTCACAGTGGGGACCTCTTTAATGGTGTTTTGGAAAGTGGCATTCCTGTAGTKATCAAAAGGATTGACATCCGATCAACTCAGAAGGATGCTTACTTGTCGGAATTGGATTTTTTCAATAAGGTTTCTCATCCGAGATTTGTTCCCTTGTTGGGTCACTGCTTAGAGACTGAGAATGAAAAGTTTCTCATTTATAAAGCTATGCCAAATGGGGACTTGTCGAYTTGCTTGCACTACAAAAAGACGGTGTCTGAAGATGATAAATTGAAGTCACTGGACTGGATAACAAGGTTAAAAATTGCTACTGGAGCAGCAGAGGCCCTGGCTTATCTACATCATGAATGTAATCCACCAATTGTTCATAGAGATGTCCAAGCAAGCAGTATACTTTTAGAAGATAAATACGAAGTTCGGTTAGGGAGTCTAAGTGAAGCATGCCCTCAAGATGGGGATACTCAACAAAGCAAAATTACCCGGTTGCTACGGTTGCCCCAGTCTTCTGAACAAGGCACATCTGGTTCYTCAACATCGGTTTGTGCCTATGACGTGTATTGTTTTGGGAAAGTTTTACTTGAGCTGGTGACTGGCAAGCTGGGAATCAGTGCAGCCAGTGATGCCGAAGCGAAGGAATGGCTGGAGCAGATTCTACCTTGCATTACTATTTATGACAAGGAGCGTATAACAAAAATAGTGGATCCATCTCTTATCGTTGATGACGAGGATTTATTAGAGGAAGTGTGGGCAGTGGCCATTGTTGCCAGGACTTGCCTAAATCCTAAACCTTCAAGAAGACCCCAAATGAGACATGTTCTMKGGGCTTTAGAAAACCCTTTTAAAGTTGTAAGGGAAGAAAATTCCAGTTCTGCTCGGCTTAGATCAACTTCATCGAGAGGCTCATGGAACGCTACATTGTTTGGTAGTTGGCGTCAGAGTTCATCCGATGTAGCAGTAATTCCAGCAGCCTCTAGTACAAGAATAGAAAGAGAGAGTAGTTTAAAGCATTCGGGAACTACCGGCTCGGAGATTAGCCTCCAAAATGTTGGTGGTGATATGTCATCCATATCTCCAGAACCATCTGGAGTTGAAGGCCTGAAGTCTTGA 2484 0.4364 MVDQRNIVSFIPLFLLLWLKLFHFELTLEQQVQQLSSPAERAALLQLRSSLGLRSKEWPRKADPCSNWIGVRCQNGRVVGINISGFRRTRIGRRNPQFSVEALANLTLLQSFNASNFRLPGPIPDWFGQKLHSLRVLDLRSCFXTGVIPPGVGNLTNLTSLYLSDNNLTGVLPNSLGQLSVLSVLDLSKNFINGSLPTWFXSLGNLSSLDISANHLSGSIPPGIGTLSKLQFLVLRQNNFTGALPVELWSLPQLSFLDVSSNNFTXXLPNSSSIANATVGQLNISHNMFYGGLTTILRRFSSVDLSGNYFEGNVLDFMVNASIGRNCLRNVTGQRTXAECASFYAARGLAFDNFGRPNSTGDSAGKASGMSNKTKILIXAISGGVGLFVLLLLLILLLLCIRKRGNSSQRGNGVGPAPAGGSPPHPGAGSSIKFSSVGDSFSYHELLQATSDFSDASLIKHGHSGDLFNGVLESGIPVVIKRIDIRSTQKDAYLSELDFFNKVSHPRFVPLLGHCLETENEKFLIYKAMPNGDLSXCLHYKKTVSEDDKLKSLDWITRLKIATGAAEALAYLHHECNPPIVHRDVQASSILLEDKYEVRLGSLSEACPQDGDTQQSKITRLLRLPQSSEQGTSGSSTSVCAYDVYCFGKVLLELVTGKLGISAASDAEAKEWLEQILPCITIYDKERITKIVDPSLIVDDEDLLEEVWAVAIVARTCLNPKPSRRPQMRHVLXALENPFKVVREENSSSARLRSTSSRGSWNATLFGSWRQSSSDVAVIPAASSTRIERESSLKHSGTTGSEISLQNVGGDMSSISPEPSGVEGLKS* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0721 827 Pfam Protein tyrosine and serine/threonine kinase 459 731 IPR001245 GO:0004672|GO:0006468
Amo13g0721 827 Gene3D Ribonuclease Inhibitor 190 341 IPR032675 -
Amo13g0721 827 Gene3D Ribonuclease Inhibitor 37 189 IPR032675 -
Amo13g0721 827 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Amo13g0721 827 MobiDBLite consensus disorder prediction 788 827 - -
Amo13g0721 827 SMART LRR_typ_2 155 178 IPR003591 -
Amo13g0721 827 SMART LRR_typ_2 251 274 IPR003591 -
Amo13g0721 827 SMART LRR_typ_2 179 202 IPR003591 -
Amo13g0721 827 SMART LRR_typ_2 203 227 IPR003591 -
Amo13g0721 827 Pfam Leucine Rich Repeat 133 155 IPR001611 GO:0005515
Amo13g0721 827 Gene3D Transferase(Phosphotransferase) domain 1 529 756 - -
Amo13g0721 827 PANTHER RECEPTOR-LIKE PROTEIN 55 12 783 - -
Amo13g0721 827 ProSiteProfiles Protein kinase domain profile. 453 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0721 827 MobiDBLite consensus disorder prediction 796 814 - -
Amo13g0721 827 PANTHER BNAA07G03560D PROTEIN 12 783 - -
Amo13g0721 827 SUPERFAMILY L domain-like 57 311 - -
Amo13g0721 827 SUPERFAMILY Protein kinase-like (PK-like) 430 735 IPR011009 -
Amo13g0721 827 Pfam Leucine rich repeat N-terminal domain 38 73 IPR013210 -
Amo13g0721 827 MobiDBLite consensus disorder prediction 410 433 - -
Amo13g0721 827 Gene3D Phosphorylase Kinase; domain 1 429 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0721 Amo-Chr13 8851383 8855933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0721 33 626 Miscellaneous Gene Families AT2G16250 51.042 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Amo13g0721 PK_Tyr_Ser-Thr 2.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0721 - - adu:107476667 1444.1