Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0691 ATGACTGAGGCCAAAGCAGTTGAAGCTGCAACGAACAACAACACTAACCACCTTGCGGATTTCGATCCTCACAAGAAGAAGCCTAAAAGGAACAAGTATGCTTTTGCTTGTGCCATTTTGGCTTCCATGACTTCAATCTTACTTGGCTATGATATTGGTGTGATGAGTGGAGCAGCAATCTACATAAAAAGGGACCTTAAAGTTTCTGACGTCCAAATTGAAATTTTGTTGGGAATTATCAATTTATATTCCTTGATAGGGTCATGTTTGGCCGGAAGAACCTCCGACTGGATCGGACGCCGGTACACAATAGTGCTCGCCGGCGCTATCTTCTTCGCCGGAGCGATTTTGATGGGATTCTCTCCCAACTACTCGTTCCTCATGTTCGGGCGATTCGTTGCCGGCATTGGCATCGGATACGCCCTCATGATTGCTCCCGTTTACACCGCCGAAGTCTCCCCTGCTTCCTCCCGTGGATTCCTCACCTCCTTCCCTGAGGTGTTCATCAATGGAGGAATATTACTAGGATACATATCAAACTACGCATTCTCAAAAATGAAACTTCAACTCGGTTGGAGAATGATGCTCGGAATCGGAGCTYTTCCTTCAGTGATCCTAGCAGTAGGAGTGTTAGCTATGCCAGAATCACCAAGGTGGCTCGTAATGAGGGGCCGCCTTGGCGATGCAAGAAAAGTGCTAAACAAAACTTCCGACACAAAAGAAGAAGCTCAAGAACGCCTCTCAGACATTAAAAAAGCRGCCGGWATTCCAGAACACTGRAACGACGACGTCGTTCAGGTCGCAAAGCAGAACACCGGCGAGGGTGTATGGAAGGAGCTTTTCCTCTACCCTACACCCGCAGTTCGRCACATCCTAATCGCTGCACTCGGCATACACTTCTTCCAACAAGCGTCCGGCATAGACGCCGTCGTTTTGTATAGCCCTAGAATATTCGAGAAGGCTGGGATCACRAGCGACACCGATAAGCTTCTTGCAACCGTGGCCGTTGGATTTGTTAAGACTCTGTTCATCTTGGTTGCCACGTTTATGTTGGATCGTGTGGGTAGGCGTCCACTGTTACTATCCAGTGTMGGCGGTATGATACTCTCTGTTRTCACGCTCGGTATTAGCCTTACGATTATTACTCACTCCGATAAGAAGCTTATGTGGGCCGTTGGATTGAGTATTGCAACGGTTTTGTCCTACGTGGCCACGTTRTCGATCGGTGCGGGTCCCATCACGTGGGTTTATAGCTCTGAGATTTTTCCGTTGAGGTTGAGGGCGCAGGGCGCGGCTATGGGTGTTGTGGTGAATAGAGTCACRAGTGGGGTTATTTCAATGACCTTTTTGTCCCTGTCCAAGGCAATTTCTATTGGTGGTGCATTCTTCCTTTTCGGTGGAATTGCCACTGTTGGGTGGATATTCTTCTATACCATGCTACCTGAAACAAGAGGTAAGACTCTTGAGGACATGGAAGGGTCTTTTGGTCAATTCAGGGCTAACCCTGCTGGTACRAAGGGAGTTGACAATGGTAATAAGGGCCAAGTCCAGCTAGGAACAACAACCAATAATGTCCAATCTTAG 1584 0.4766 MTEAKAVEAATNNNTNHLADFDPHKKKPKRNKYAFACAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILLGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGAIFFAGAILMGFSPNYSFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKMKLQLGWRMMLGIGAXPSVILAVGVLAMPESPRWLVMRGRLGDARKVLNKTSDTKEEAQERLSDIKKAAGIPEHXNDDVVQVAKQNTGEGVWKELFLYPTPAVRHILIAALGIHFFQQASGIDAVVLYSPRIFEKAGITSDTDKLLATVAVGFVKTLFILVATFMLDRVGRRPLLLSSVGGMILSVXTLGISLTIITHSDKKLMWAVGLSIATVLSYVATLSIGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLSKAISIGGAFFLFGGIATVGWIFFYTMLPETRGKTLEDMEGSFGQFRANPAGTKGVDNGNKGQVQLGTTTNNVQS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0691 527 Pfam Sugar (and other) transporter 37 493 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo13g0691 527 CDD MFS_PLT 40 491 IPR044776 GO:0005351
Amo13g0691 527 Gene3D MFS general substrate transporter like domains 27 497 IPR036259 -
Amo13g0691 527 SUPERFAMILY MFS general substrate transporter 13 492 IPR036259 -
Amo13g0691 527 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 20 516 IPR045262 GO:0015144
Amo13g0691 527 Coils Coil 226 253 - -
Amo13g0691 527 ProSitePatterns Sugar transport proteins signature 2. 133 158 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo13g0691 527 ProSitePatterns Sugar transport proteins signature 1. 91 108 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo13g0691 527 MobiDBLite consensus disorder prediction 502 527 - -
Amo13g0691 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 484 IPR020846 GO:0022857
Amo13g0691 527 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0691 527 MobiDBLite consensus disorder prediction 508 527 - -
Amo13g0691 527 PRINTS Sugar transporter signature 419 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0691 527 PRINTS Sugar transporter signature 302 312 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0691 527 PRINTS Sugar transporter signature 45 55 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0691 527 PRINTS Sugar transporter signature 128 147 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0691 527 PRINTS Sugar transporter signature 396 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0691 527 PANTHER SUGAR TRANSPORTER 20 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0691 Amo-Chr13 8449317 8453098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0691 9 523 Organic Solute Cotransporters AT3G18830 71.923 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0691 - - lja:Lj3g3v3338420.1 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0691 13 8449317 8453098 Amo18g0334 18 4578168 4580341 PCT