Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0688 ATGGAGGAAAAGGTACCTCAGCTCATTATACGTTTCAAACTTTCGAAGCCTAAAGAAGAAGAGTTAAGAAAAGAAAGAAGAAGAGAGGCCAACAGAAGATGTGTCCAGAGGAAGAGAAAGAGAGAACAGGAAGCATTCCAAGAGCTCGAAGGATCCGTGGCAAAGCTTAGAACTGAAGTCCAATTACTCCATGAAGAACTTACTAGACTTGACAAGGAAAATAAGGAACTCGACGAGGAAAATAACTCCATTCAAGATTATGAGTTTGCTTGTTTAGATTTATAA 285 0.3895 MEEKVPQLIIRFKLSKPKEEELRKERRREANRRCVQRKRKREQEAFQELEGSVAKLRTEVQLLHEELTRLDKENKELDEENNSIQDYEFACLDL* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0688 94 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Amo13g0688 94 Gene3D - 18 84 - -
Amo13g0688 94 SUPERFAMILY Leucine zipper domain 22 77 IPR046347 GO:0003700|GO:0006355
Amo13g0688 94 Coils Coil 39 90 - -
Amo13g0688 94 Pfam bZIP transcription factor 19 81 IPR004827 GO:0003700|GO:0006355
Amo13g0688 94 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0688 19 86 bZIP Transcription Factor Family AT4G36730 42.647 5.31e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo13g0688 bZIP_1 1.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0688 - K11499 aip:107628919 105.145