Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0681 ATGGAGGAAAAGGTACCCAATAATAAGCTCATTATACGTTTGAAACCTTCAAAGCCTAAAGAAGAAGAGTTAAGAAAAGAAAGAAGAAGAGAGGCCAACAGAAAATGTGCTCAGAGGAAGAGAAAGAGAGAACAGGAAGCATTCCAAGAGCTCGAAGGATCCGTGGCAAAGCTTAGAACTGAAGTCCAATTATTCCATGAAGAACTTACTAGACTTCACAAGGAAAATAAGGAACTCGACGAGGAAAATAACTCCATTCAAGATTATGACTTTGCTTGTTTAGATAGATAA 291 0.378 MEEKVPNNKLIIRLKPSKPKEEELRKERRREANRKCAQRKRKREQEAFQELEGSVAKLRTEVQLFHEELTRLHKENKELDEENNSIQDYDFACLDR* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0681 96 Coils Coil 34 89 - -
Amo13g0681 96 MobiDBLite consensus disorder prediction 1 31 - -
Amo13g0681 96 MobiDBLite consensus disorder prediction 1 43 - -
Amo13g0681 96 Pfam bZIP transcription factor 21 83 IPR004827 GO:0003700|GO:0006355
Amo13g0681 96 SUPERFAMILY Leucine zipper domain 24 79 IPR046347 GO:0003700|GO:0006355
Amo13g0681 96 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Amo13g0681 96 Gene3D - 20 87 - -
Amo13g0681 96 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0681 21 88 bZIP Transcription Factor Family AT4G36730 42.647 2.46e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo13g0681 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0681 - K11499 aip:107628919 124.02