LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g0656	ATGGTGTTTGGAAGCATCAGCAGCAAATACAAGCAAGTGCTCCAACAGAAACACATTCACTCTCATACTTATCACACAACAATGGCATCCTCCGCCCCTAACAATAATAATAATAATCTTCCGCTGAAGCCCATTCCGGGAAGCTACGGCCTCCCGTTCTTGGGTCCCTTACACGACCGCCACGACTACTTCTACAAACAAGGCCGCGACGAATTCTTCGCCACCAGGATCCAAAAGTACAACTCCACCGTCATCAGAACCAACATGCCGCCTGGTCCCTTCATTGCTCATGACCCTAAGGTCATCGCTCTCCTCGACGCCGCCTCTTTCCCCATCCTCTTCGACAACTCTAAGGTCGACAAGCGCGACGTCCTTGACGGCACTTTCATGCCTTCTACCGCCTTCACCGGCGGCTACCGCACCTGCGCCTTCCAAGATACTACTGAACCCGAACACTCTCTCCTCAAATCCTTCTTTCTCCATATTCTCTCCTCCAAACACAACATCTTCCTCCCTCTCTTCCGAAGCCTTCTCACCGATCATTTCAATAACATGGAAGAGAGCCTCGCCGGAAAGTCCAAAGAAGCCAGCTACAACACCTCCATCGGCGCCGTCGCCTTCACTTTCATCTTCCGTCTCCTCACTGACAAGGATCCAAACACCACCGTCATCGGAAGCGAAGGTCCGAAGCTCGTGGAGACTTGGCTCGGAGCTCAGCTCGCTCCTCTCGCAACCCTTGGGTTACCGAAAATCTTCAACTACGTCGAAGATGTACTGATCCGAACGGTGCCGTTTCCGGCGTGGGCCGTAAAAGGTAGCTACAACAAGCTCTACGAAGGAGTATCGACGGCGGGGACGGCGGTGCTGGACGAAGCGGAGAAATTAGGAATCAAAAGAGACGAAGCATGCCACAACCTTGTTTTCATGTTAGGGTTCAACGCTTTCGGTGGTTTATCGAACCAGTTTCCGATCCTAATCAAGTGGATAGGTTTGGCAGGGGAAGGTTTACACAAGCAACTCGCTGATGAAATCAGGACCGTTGTTAGGGACGAAGGCGGGGTAGTGAGTCTTGCAGCGTTGGATAAGATGACTTTGACCAAATCAGTGGTGTACGAAGTACTCAGGATAGAGCCTGCTGTGCCGTACCAGTACGCCAAAGCGAGGGAGGATCTGGTGGTGCAGAGCCACGATGCGGCCTACGAGATCAAGAAAGGGGAGATGATCTTTGGATATCAGCCGTTCGCTACGAAGGACCCGAAGATCTTTGAGAATCCCGAAGAGTTTGTGGGCCATAGGTTTATTGGAGATGGAGAGAGGCTGTTGAGAAACGTGTTCTGGTCTAATGGGCGTGAGGTGGACGAGCCCACAGCGGATAACAAGCAGTGCCCGGCGAAGAATCTTGTGGTGCTGCTGTGTAGGGTGTATTTGGTGGAGTTCTTCTTGCGTTATGACACGTTTGCATTCGATTGGAAGCCACTTGTTTTGGGTCCCACAGTTACCATCAAGTCCTTAACCAAGTGCTCCAATTTTTAA	1533	0.5147	MVFGSISSKYKQVLQQKHIHSHTYHTTMASSAPNNNNNNLPLKPIPGSYGLPFLGPLHDRHDYFYKQGRDEFFATRIQKYNSTVIRTNMPPGPFIAHDPKVIALLDAASFPILFDNSKVDKRDVLDGTFMPSTAFTGGYRTCAFQDTTEPEHSLLKSFFLHILSSKHNIFLPLFRSLLTDHFNNMEESLAGKSKEASYNTSIGAVAFTFIFRLLTDKDPNTTVIGSEGPKLVETWLGAQLAPLATLGLPKIFNYVEDVLIRTVPFPAWAVKGSYNKLYEGVSTAGTAVLDEAEKLGIKRDEACHNLVFMLGFNAFGGLSNQFPILIKWIGLAGEGLHKQLADEIRTVVRDEGGVVSLAALDKMTLTKSVVYEVLRIEPAVPYQYAKAREDLVVQSHDAAYEIKKGEMIFGYQPFATKDPKIFENPEEFVGHRFIGDGERLLRNVFWSNGREVDEPTADNKQCPAKNLVVLLCRVYLVEFFLRYDTFAFDWKPLVLGPTVTIKSLTKCSNF*	511

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g0656	510	PANTHER	FATTY ACID HYDROPEROXIDE LYASE	34	498	-	-
	Amo13g0656	510	PRINTS	E-class P450 group IV signature	363	379	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g0656	510	PRINTS	E-class P450 group IV signature	400	414	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g0656	510	PRINTS	E-class P450 group IV signature	416	434	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g0656	510	SUPERFAMILY	Cytochrome P450	40	492	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g0656	510	Pfam	Cytochrome P450	338	434	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g0656	510	Gene3D	Cytochrome P450	36	509	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g0656	510	PANTHER	CYTOCHROME P450 26	34	498	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo13g0656	Amo-Chr13	8111711	8113564	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo13g0656	17	508	Cytochrome P450	AT5G42650	46.653	2.94e-161	466

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g0656	K01723		-	gmx:100810890	784.637

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo13g0656	13	8111711	8113564	Amo13g0656	13	8111711	8113564	ECH