Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0644 ATGATGCATCATCATCAGCAGAACAAGCCTAATTCTTTCTGTGCAATCATCATGAATGGCCTCAACACCCATCACTTGAAAATACCAACCAAGTTTCTGAATTATTTGGATAAAAAATTGATGAGGAATGCAATTCTAATAGGCCCTTGTGGGGGCAAGTGGCAAGTGAGCATAATCAAGAGAGAAAATGGAGTTTACATGGACCATGGTTGGTCAAAGTTTCTACAAGAAAACCTAGTTAAGCATGAGGATTTCTTGGTTTTCACATATGATGGAAATAATAACCATTTCAAGGTCCAAATATTTTGTAAAAATGGATGTGAAGCTCCAAAACCTAAGAAGAGTAGACCAACAACTTCATGCCCTCAGATTTCACCTGAAAATGAAAGATCATAA 396 0.3687 MMHHHQQNKPNSFCAIIMNGLNTHHLKIPTKFLNYLDKKLMRNAILIGPCGGKWQVSIIKRENGVYMDHGWSKFLQENLVKHEDFLVFTYDGNNNHFKVQIFCKNGCEAPKPKKSRPTTSCPQISPENERS* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0644 131 CDD B3_DNA 12 103 IPR003340 GO:0003677
Amo13g0644 131 Gene3D - 4 107 IPR015300 -
Amo13g0644 131 MobiDBLite consensus disorder prediction 116 131 - -
Amo13g0644 131 SUPERFAMILY DNA-binding pseudobarrel domain 8 107 IPR015300 -
Amo13g0644 131 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0625400-RELATED 6 122 - -
Amo13g0644 131 PANTHER B3 DOMAIN-CONTAINING 6 122 - -
Amo13g0644 131 ProSiteProfiles B3 DNA-binding domain profile. 11 105 IPR003340 GO:0003677
Amo13g0644 131 SMART B3_2 13 105 IPR003340 GO:0003677
Amo13g0644 131 MobiDBLite consensus disorder prediction 108 131 - -
Amo13g0644 131 Pfam B3 DNA binding domain 21 103 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0644 13 129 REM Transcription Factor Family AT3G06220 29.060 1.09e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Amo13g0644 B3 9e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0644 - - cam:101507121 114.39