Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo13g0637 | ATGACATCTAATATTACAACCTTCAACCTTGGATATGATATGCCAACAATGGCTGCTTCTCTCTCCTCTCTCCTTCTTCCACTAGGTTCTACTTGTAAAAGTTTGGGCTGCAATCCTCAAGGCATTGCTGCTGACAGGCTTCGATGCTTGGTTCCGCAATACCGAAGATCGGTGGTAAAAGTAAAGGCCTCAGATACAACTGAATGTGCTGCTATGGTTAATACCAATTCCCGCAGAGACTTTCTTGGATTGGCTTTGGGAATCTCAAGCCTCTTTGTTGGTTCATTGGAAGCCAAAGGAGCTGGTTTGCCCCCGGAAGATAAGCCGAAACTATGTGATGAAGCTTGTGAGAAGGAGCTTGAAAATGTGCCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGACAAGGTCCTAGTCCCCCAGTTGGATTTCAGGTAGCAGCTAATTATGTAGCAATGGTTCCTTCCGGACAAGTATTTGATAGTTCATTGGAGAAAGGCCAGATTTACATTTTCCGTGTCGGTTCTGGTCAGGTGATAAAGGGTCTTGATGAAGGTCTTCTGAGCATGAAAGTAGGAGGGAAGCGTCGACTGTACATACCTGGACCATTGGCATTCCCAAAAGGCCTTACATCAGCTCCAGGGAGACCAAGGGTGGCTCCAAATAGTCCAGTCATATTTGATGTTAGTTTGGAATATATACCAGGGCTTGAAGTGGATGAGGAATAA | 744 | 0.4449 | MTSNITTFNLGYDMPTMAASLSSLLLPLGSTCKSLGCNPQGIAADRLRCLVPQYRRSVVKVKASDTTECAAMVNTNSRRDFLGLALGISSLFVGSLEAKGAGLPPEDKPKLCDEACEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQVFDSSLEKGQIYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLEVDEE* | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo13g0637 | 247 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 148 | 236 | IPR001179 | GO:0003755 | |
| Amo13g0637 | 247 | Gene3D | - | 107 | 237 | IPR046357 | GO:0003755 | |
| Amo13g0637 | 247 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC | 22 | 247 | - | - | |
| Amo13g0637 | 247 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 22 | 247 | - | - | |
| Amo13g0637 | 247 | SUPERFAMILY | FKBP-like | 114 | 236 | - | - | |
| Amo13g0637 | 247 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 148 | 240 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo13g0637 | Amo-Chr13 | 7928921 | 7932066 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo13g0637 | 129 | 236 | Calmodulin-binding Proteins | AT3G25230 | 36.697 | 1.31e-12 | 65.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo13g0637 | K01802 | - | gmx:100784939 | 362.073 |