Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0627 ATGATGACTAGCAGCTCTTTGAACTCAGATGATCCTTGTTTTGATGGTGATGGAAAATGGGCCACCAAGCTTCTTAGGGAGTGTGCTAGAGCAATCAATGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAGTTAGCTTCCCCTTATGGAGATTCTCAGCAGAAACTAGCCTCATATTTTCTTCAAGCTCTATTCTGCAAGGCCACTCAAACAGGCCAAAGATTCTACATGAATCTAAAATCAGCATCTGAAAAGAACCAATCTTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGGTGCAATCTTGGAAGCCTTTTTAGAAGCAGGAGGAGAGAAAAACAAAAAGAAAAAGCTTCACATCATTGACATAAGCAACAACACTAGCACATTTTGCACTCAATGGCCTACTTTCTTGGAATCCTTGGCTACTAAGAGTAGTGATCATGTTGAAACTCCTCAATTGAAGCTGACAATTGTGTTGGTGAAAGAGAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTCAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTGCCCTTTGAGATTAACATGATAAATGGTGTGGAACATTTATGGAAGGTAACAAAAGAAGAGTTAGGAATAGTAGTTGAAGAAGAAGATAATGATGATGATGATGAGGTTTTTATTGCTGTGAACTGTGTTGGGGGATTGAGGAGAGTTGAGGAGGGAGAAAGGGGTAATGTAATTGGAATTTTGAAGTCTCTTAGTCCAAGAATTGTGACAATTGTTGAGGAAGAAAGTGGTGGTAGTGATGATTCTTGCATCACAAGAAATGATGATGATGACTTTGTAAAATGCTTTGAAGAGTGTTTAAGGTTTTACAAGATTTACTTTGAGATGTTAGAGGAGAGTTTTCCAACAATAAGCAATGAAAAGTTAATGCTAGAGAGGGAGTGTTCAAGAAACATACTTGTTGATTTGGGTTGCAATAATAATAATAATAATGATAGTGATCATAATAAAAGGGAGAGAGGAGTAGAGTGGTCTATGAGGTTTAGGGAGTATTTTACTCCAATAGGTTTGAGTGATGATGTTGTGGATGATGTTAGGGCATTGCTAAAGAGATATAATAGGTCAGGGTGGTCATTGATGTTGCCATCATCAAAAGTAGAAGGAATTTACTTGAAATGGAGGGATCAACCTGTTCTTTGGGCTTCAGCTTGGAAACCCTAG 1281 0.3786 MMTSSSLNSDDPCFDGDGKWATKLLRECARAINDRDSSKIQHLLWMLNELASPYGDSQQKLASYFLQALFCKATQTGQRFYMNLKSASEKNQSFDSARKMILKFQEVSPWTTFGHVASNGAILEAFLEAGGEKNKKKKLHIIDISNNTSTFCTQWPTFLESLATKSSDHVETPQLKLTIVLVKESLKGSVMNEICQRMEKFARLMRVPFEINMINGVEHLWKVTKEELGIVVEEEDNDDDDEVFIAVNCVGGLRRVEEGERGNVIGILKSLSPRIVTIVEEESGGSDDSCITRNDDDDFVKCFEECLRFYKIYFEMLEESFPTISNEKLMLERECSRNILVDLGCNNNNNNDSDHNKRERGVEWSMRFREYFTPIGLSDDVVDDVRALLKRYNRSGWSLMLPSSKVEGIYLKWRDQPVLWASAWKP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0627 426 Pfam GRAS domain family 22 425 IPR005202 -
Amo13g0627 426 ProSiteProfiles GRAS family profile. 12 425 IPR005202 -
Amo13g0627 426 PANTHER PROTEIN SHORT-ROOT-LIKE 5 425 - -
Amo13g0627 426 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 425 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0627 Amo-Chr13 7776342 7777622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0627 6 426 GRAS Transcription Factor Family AT4G37650 47.936 4.61e-125 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo13g0627 GRAS 1.2e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0627 - - adu:107477059 801.586