Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0593 ATGCCTCGCATTCCCCCAATTCTATTCCTTTTTTACTTCGCTGTGTTCACTTTGCAGCTCTTAACACAAGCGGTATCACGTTCGGTTTTCTACGTTAATCTAATTCTGATGGAGGTTGAGATTGATGGCTCTAATAATGGGGAGGCAATAGAAAATGCTGCCATGGCTGACGATTGTAGCACCGATGAAGGAAACAACGCAGATGAAGCAAACAATGCTGATGAAGGGAACAACGCTGACGAAGGAAACAATGGTGATGATGGAAATAACATCGATGGACGTGCTATTGTGCCAGTTCAAAGCCAAGGTCAAGATGTGACTCAAGTTTCTGCTGGAGGGGCCATAACCCTAGCTGTTCCCACACTTCCGGTCCCAATTGTTTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAAGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAACTCTCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAGTAAAATCTGGTAGCTGGGTTGTTACACGTTTTGTAAAGGAACACACACATCCTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGGCGAACGGGATAGAATTCGGGAATTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTGCCACCTATAAAAGACATCTTGAATTGATACTCGAGCACATTGACGAGTATAACGAGAGCCTATCGAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACCCTTTAA 960 0.4365 MPRIPPILFLFYFAVFTLQLLTQAVSRSVFYVNLILMEVEIDGSNNGEAIENAAMADDCSTDEGNNADEANNADEGNNADEGNNGDDGNNIDGRAIVPVQSQGQDVTQVSAGGAITLAVPTLPVPIVSPVEPYVGQEFESEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRENVIRQRAETRVGCKAMIMVRKVKSGSWVVTRFVKEHTHPLAGPGGGRRDFIYEQYPGERDRIRELNQQLTAEKKRSATYKRHLELILEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0593 319 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 70 309 - -
Amo13g0593 319 MobiDBLite consensus disorder prediction 65 85 - -
Amo13g0593 319 MobiDBLite consensus disorder prediction 58 94 - -
Amo13g0593 319 Pfam FAR1 DNA-binding domain 147 232 IPR004330 -
Amo13g0593 319 Coils Coil 286 306 - -
Amo13g0593 319 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 70 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0593 Amo-Chr13 7484108 7486458 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g0593 FAR1 4.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0593 - - adu:107476765 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0030 18 951712 954317 Amo13g0593 13 7484108 7486458 PCT
Amo13g0593 13 7484108 7486458 Amo18g0030 18 951712 954317 PCT