Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0589 ATGAGTTCAAATCAAAGTTCATTGAAGCAGCTAGCTCTAGCTATGGTTGCTTGTAAGCTTTTGAGATGGCAAGTTTATCTTTCTTCTTCTCACCAACTCATCAGCAATATGCAAGTGAGAGACTTGTTAATCTATGGTTTGAACATGCAACTGTGGTTATTTTTTCATGTGATGGTTCTATCATACTTGTGGTCACAAGTTACAAGTCTTGGATCCATGTCTTCCATTGCAATATCTTATGGAGAACAAGGTTCAGTCTTTTGTGGYTTGAAGCTTGATGGGTCCCATACTGTTACCTGTTATGGATCCAACACAGCCATAATCTATGAAACACCATCWCATTTCTCATTCATTGGTCTAACTGCTGGTGATGGCTTTATATGTGGACTTTTAATGGATTCAAACCAACCCTATTGTTGGGGTAGCAGTGGCTACATTGAAATGGGGGTGCCTCAACCAATGATCAAGGAAGCTGAATACATAGACATCAGTGCTGGTGATCACCATGTATGTGGATTGAGGAAGCCATTAACTGGAAGATTCAGGAACACTTCATTTGTTGATTGTTGGGGTTACAACATGACTAGGARCTATGTGTTTGATGGAATGTTTCAGTCAATTTCAGCAGGTTCTGGATTCAACTGTGGCCTTTTCTCTCAGAATAGGAGTGTGTTCTGCTGGGGTGATGAGACTAGTAGCAGGGTCATTACTTTGATTCCAGATGACAAAAGATTCCAGAGAATCTCAGCTGGTGGATACCATGTTTGTGGAATATTGGAAGGTGTGAAGAATTCAAGAGCTGTTTGTTGGGGAAGAAGCTTGGATATAGAAGAAGAAATCTCAGTTTCAGTGAAACAACATGCTGGTAGTTATGGTCAAGGTAATGTTGATTTGGCACCAAGTGATCCAATGCTATCTGTTGTTGGAGGAAAGTTTCACGCATGTGGAATCAAAAGCTATGATAGGGAAGTGATTTGTTGGGGATTCATCATCAAACCAAGCACACCACCACCAAGTGGAACCAAGGTGTTTGAGATTGCTGSTGGTGATTACTTYTCTTGTGGTGTTCTTGCTGAAAGATCTCTTATGCCTGTTTGCTGGGGTGTTGGTTTTCCAAAAACACTACCTTTGGCTGTTTCACCAGGAATGTGCAAGTCAAATCCATGTCCTCCTGGATTCTATGAGATTGATCTCCAAAARGGTCTTTGCAAGTCAACAGATTCAAGAATTTGCATTCATTGCAGCAGTGGTGATTGTCCTTCTGAGATGTACCAGAAGAGTTCTTGTGGTGTGAATTCTGATAGAATATGTGAATATAATTGTTCTTCATGTTTTTCATCTAAGTGCTTATCAAATTGCTCATCTTCTAATTCTGAGAAGAAGAAAAATGATGATAAGTTTTGGGCTTTGCAGTTACCAGTTGTTATTGCTGAGATTGCTTTTGCAGTGTTCTTGGTTTGTATTGTGTCGTTGACTTCAGTTTTGTATGTTAGATACAAGCTAAGAGATTGTGAGTGTTCTTCAGTAAGGTCAAAGGTGAAGAAACTCAATGGTGGTTCTAACAGCAAGAGCAGGACAAATTTGGAGGAGTTCAAGATTAGGAGGGCTCAAATGTTCACCTATGAGGAGCTTGAAACTGCAACTAATGGATTTAAAGAAGAATCCATTGTTGGGAAAGGAAGCTTCTCTTGTGTGTTCAAGGGTGTTCTGAAAGATGGCACTGTTGTTGCTGTTAAGAGGGCCATAGTTTCCACAAACATGCAGAAGAATTCAAAGGAGTTTCACACAGAACTTGACTTGCTATCAAGGTTGAACCATGCACATTTGCTGAACCTATTAGGATATTGTGAAGAAGGAAACGAAAGGCTTCTTGTCTATGAGTTCATGGCCCATGGTTCCTTGCATCAACACCTTCATGGACCAAATAAGGTGTTAAAGGAGCAGCTAGATTGGATAAGGAGAGTAACAATTGCAGTCCAAGCAGCAAGAGGAATTGAGTACTTGCATGGATATGCATGTCCACCAGTGATTCACAGAGACATAAAATCATCAAACATTCTCATTGATGAAGAACACAATGCAAGAGTTGCTGATTTTGGCTTGTCATTGTTAGGCCCTGCAGACAGTGGTTCACCACTTGCTGAATTACCAGCTGGTACTCTTGGTTATCTTGATCCAGAGTACTATAGGCTTCACTACCTCACCACAAAATCTGATGTATATAGCTTTGGTGTTCTGTTATTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATTGTTGAATGGGCAGTGCCATTGATCAAGTCAGGTGACATAGCTGCAATATTAGACCCAGTTTTGAAACCTCCTAGTGATCTTGAGGCCTTGAAAAGGATTGCAAATGTGGCATGCAAATGTGTGAGGATGAGAGGGAAAGAAAGACCTTCAATGGACAAAGTAACAACAGCATTGGAAAGAGGGTTAGCAATGCTAATGGGAAGTCCTTGCATTGAGCAACCAATTTTGCCAACTGAGGTTGTTTTGGGAAGCAATAGGTTGCACAAGAAATCATCACAAAGATCATCAAATAGATCAGCTTCTGAGACCACTGAGGTAGCAGAAACTGAGGATCAAMGGATTGAGTTCAGGGCACCATCATGGATAACATTCCCAAGTGTTACATCTTCTCAGAGGAGGAAGTCTTCAGTGTCAGATGCTGATGTTGAAGGAGGGAAGAACAACAACAATAACATTAGTAATAATGCAGAAGTGAATAAGAATTTGGGAAATGTTGTTGGTGTTGGTGGTGATGGTTTGAAGAGTCTTGAGGAAGAGATTGGACCTGCTTCTCCTAGAGAGAGGTTGTTCTTGCAACATAACTTCTAA 2886 0.4054 MSSNQSSLKQLALAMVACKLLRWQVYLSSSHQLISNMQVRDLLIYGLNMQLWLFFHVMVLSYLWSQVTSLGSMSSIAISYGEQGSVFCGLKLDGSHTVTCYGSNTAIIYETPSHFSFIGLTAGDGFICGLLMDSNQPYCWGSSGYIEMGVPQPMIKEAEYIDISAGDHHVCGLRKPLTGRFRNTSFVDCWGYNMTRXYVFDGMFQSISAGSGFNCGLFSQNRSVFCWGDETSSRVITLIPDDKRFQRISAGGYHVCGILEGVKNSRAVCWGRSLDIEEEISVSVKQHAGSYGQGNVDLAPSDPMLSVVGGKFHACGIKSYDREVICWGFIIKPSTPPPSGTKVFEIAXGDYFSCGVLAERSLMPVCWGVGFPKTLPLAVSPGMCKSNPCPPGFYEIDLQKGLCKSTDSRICIHCSSGDCPSEMYQKSSCGVNSDRICEYNCSSCFSSKCLSNCSSSNSEKKKNDDKFWALQLPVVIAEIAFAVFLVCIVSLTSVLYVRYKLRDCECSSVRSKVKKLNGGSNSKSRTNLEEFKIRRAQMFTYEELETATNGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSTNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGNERLLVYEFMAHGSLHQHLHGPNKVLKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDIAAILDPVLKPPSDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAMLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSASETTEVAETEDQRIEFRAPSWITFPSVTSSQRRKSSVSDADVEGGKNNNNNISNNAEVNKNLGNVVGVGGDGLKSLEEEIGPASPRERLFLQHNF* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0589 961 ProSitePatterns Protein kinases ATP-binding region signature. 557 579 IPR017441 GO:0005524
Amo13g0589 961 ProSiteProfiles Protein kinase domain profile. 551 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0589 961 SMART serkin_6 551 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0589 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Amo13g0589 961 MobiDBLite consensus disorder prediction 893 923 - -
Amo13g0589 961 PANTHER RECEPTOR-LIKE KINASE 53 961 - -
Amo13g0589 961 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 53 961 - -
Amo13g0589 961 Gene3D Transferase(Phosphotransferase) domain 1 629 831 - -
Amo13g0589 961 MobiDBLite consensus disorder prediction 853 869 - -
Amo13g0589 961 Gene3D Phosphorylase Kinase; domain 1 521 628 - -
Amo13g0589 961 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 388 437 IPR001368 GO:0005515
Amo13g0589 961 SUPERFAMILY Protein kinase-like (PK-like) 528 824 IPR011009 -
Amo13g0589 961 SUPERFAMILY RCC1/BLIP-II 68 329 IPR009091 -
Amo13g0589 961 Pfam Protein kinase domain 551 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0589 961 Gene3D - 109 380 IPR009091 -
Amo13g0589 961 MobiDBLite consensus disorder prediction 853 878 - -
Amo13g0589 961 SUPERFAMILY RCC1/BLIP-II 289 377 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0589 Amo-Chr13 7461594 7465420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0589 52 961 Receptor kinase-like Gene Family AT3G59420 66.630 0.0 1222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo13g0589 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0589 - - gmx:100797455 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0589 13 7461594 7465420 Amo18g0031 18 954658 957858 PCT