Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0585 ATGGGGGTTATGTCTAGGCGGGTTGTGCCTGCTTGTGGTAATCTATGTTGTGTTGTTTGTCCTGCTATGAGAGCGAGCTCAAGGCAACCTGTGAAACGATACAAGAAGTTGCTAGCTGATATTTTCCCGCGGAATCAGGAGGCTGAGCTTAATGATAGAAAAATTGGAAAGTTATGCGAGTATGCTTCTAAGAATCCATTAAGAATTCCTAAGATAACTGAGAATTTGGAGCAAAGATGTTATAAGGATTTGCGTAATGAAATGTTTGGTTCAGTTAAAGTTGTCTTGTGCATATACAGGAAATTCTTATCGTCATGTAAGGAGCAGATGCCACTATATGCCAGTAGTTTATTAGCAATAATTCGGACTCTTCTGGAACAGTCTCGAACAGATGAAATCAGGATATTAGGCTGCAACACTCTTGTTGATTTTATAGAATGCCAGACAGATGGTACGTACGTGTTCAACTTAGAGGGTTTTATACTTAAACTATGCCAATTGGCTCAAGAAGTGGGCGAAGATGAACGAGCTCTGCATCTACGTTCAGCAGGACTACAAGCTCTATCCTATATGGTGCGTTTCATGGGTGAGCACTCACATCTTTCCATGGATTTCGATGATATTATATCAGTGACTTTGGAGAATTACATGAATCATCAATCTAACTCCAACAATGTCAAGGAAGATAACCTGAATTCAGTGTTCCTGGACTCAATGCTGGACACTGCAAGAGATCCTACGTATTGGTCAAAGGTTTGCTTGTATAATATGGTCAAAGTGGCGAGGGAGGCTACAACTTTGCGGCGTTTCCTTGAACCTGTCTTTCATAACTTRGATATCGAAAACCAATGGCCKTCTGAAAARGGCACTGCATCTTCTGTTTTGATGTATTTACAATCGCTATTAGAAGAATCAGGAGACAACTCCCATCTTCTCTTGTCCATTTTGGTTAAACACTTGGATCATAAGAATGTTGCCAAGCAGCCTATTGTTAAGACGAATATTGTTAACACCATAACACAGCTTGCACAGAATATGAAGCAACACGCTTCTGTGGCAACAATCGGCGCAATATCTGACCTCGTTAAACATTTAAGGAGGTGCCTACAAAATTCAGCTGAAGCTCCCTGCATTGGAAATGATGGGTATAAGTTGAATGCTGAACTCCAATCGGCCCTAGAAATGTGTATATTACAACTTTCTAAAAAGGTTGGCGATGTAGGACCTATTCTTGATTTGTTAGCTGTGGTGTTAGAGAATATCTCAAATAATACCATTATAGCAAGGACAACTATCTCTGCTGTTTATCAAACTGCAAAATTAATCACATCCATTCCTAATGTATCATATCACAAGAAGGCCTTCCCTGATGCCTTGTTTCATCAATTGCTCCTAGCGATGGCTCACCCTGACCATGAAACACGAATTGGGGCACATAGCATCTTCTCTATAGTACTTATGCCATCCGTGTTTTCTTCCCAACTAGACCAGAAAAAGAAGATAGTTCACATTCACAAGGTTTCAAGGGAAGGTTTCTCCATTCAGCATGACGGCTTTTCGGGAGAAGAACACGTGAATGGAAAACCTGCGGAAGGAAATACAGTAGCAGGTTTCAGTGGGAAATTTGTAGTTCATCCGCATTGTGATTACAGCTTTTCTAGTGCTCTAACCAATGGAAAAGATGAGCTTAGTTCTTTCCGATTAAGCAGCCACCAAGTGAGTCTCTTGCTTTCTTTAATCTGGGTTCAGGCAACATCTGCAGAAAATGGCCCTGCAAATTTTGAGGCAATGGCTCACACTTATAGCATTGTTTTATTGTTCACTCGTTCTAAGACATCTGGTCACATGGCTCTAGTAAGATGTTTCCAACTGGCATTCTCACTCAGGAGCATCTCTTTGGATACTGAAGGAGGTTTACAACCATCTCGCAGGAGGTCTCTTTTTACCTTGGCATCATACATGCTTATATTTTCTGCAAGGGCTGGAAGCTTCCCTGAACTAATTCCAAAAGTTAAAGTATCCCTGACAGAGACTACAGTAGATCCTTTTCTTGAATTGGTCGATGATGTCAGGCTGCAAGCTATGTATATAGAACCCGGGAAGGTAGTTTATGGATCTCTGGAAGATGACATTGCGGCTGGGAAGTCGCTATCAGCATTGCAATTGGATGACAAACAGTTGAAAGAGACCGTAAAATCATACTTTCTGACCAAATATTCAAAATTACCAGAGGATGAGTTATCAAGCATAAAGGAGCAACTTCTACAGGGGTTTTCCCCTGATGATGCATATCCATTGGGACCACCGTTGTTTATGGAGACACCACGGCCATGCTCTCCACTTGCTCAGATTGAATTTCCAGATTTTAATGAGATTGTGGCTCCAGTAACTCTGGCCGATGAAGAGATTGGCCCTGAACGAGGTGGAAGTCAGTCAGATCGCATGTCATCGTTATCTATCCATAACCCTGACATCCTAAGTGTTAATCAACTTTTAGAATCGGTTTTGGAAACTGCACGGCAAGTGGCAAGTGTCCCCATCTCTTCAGCTCCAGTACCTTATGACCAAATGAAGAACCAGTGTGAGGCACTTGTTACAGGGAAACAACAGAAGATGTCAGTTCTTCAAAGTTTCAAACACCAGCAAGAGACTAGAGCGCTTGTTCTTTCAAGTGATTATGAAACAAAAGTTCCCCCTCTGTCAAATAAGACACTGGAGTATTCTGATGTTGATCTGAAGTTAGTGAGTCTGGAGCAGTTTCAACCGCGGTATCAAGTTCGCCCTTGTTCATATGATTCTCTGAGGCTACCACCATCTAGCCCATATGACAAGTTCTTGAAAGCTGCTGGATGTTAA 2856 0.4163 MGVMSRRVVPACGNLCCVVCPAMRASSRQPVKRYKKLLADIFPRNQEAELNDRKIGKLCEYASKNPLRIPKITENLEQRCYKDLRNEMFGSVKVVLCIYRKFLSSCKEQMPLYASSLLAIIRTLLEQSRTDEIRILGCNTLVDFIECQTDGTYVFNLEGFILKLCQLAQEVGEDERALHLRSAGLQALSYMVRFMGEHSHLSMDFDDIISVTLENYMNHQSNSNNVKEDNLNSVFLDSMLDTARDPTYWSKVCLYNMVKVAREATTLRRFLEPVFHNLDIENQWPSEKGTASSVLMYLQSLLEESGDNSHLLLSILVKHLDHKNVAKQPIVKTNIVNTITQLAQNMKQHASVATIGAISDLVKHLRRCLQNSAEAPCIGNDGYKLNAELQSALEMCILQLSKKVGDVGPILDLLAVVLENISNNTIIARTTISAVYQTAKLITSIPNVSYHKKAFPDALFHQLLLAMAHPDHETRIGAHSIFSIVLMPSVFSSQLDQKKKIVHIHKVSREGFSIQHDGFSGEEHVNGKPAEGNTVAGFSGKFVVHPHCDYSFSSALTNGKDELSSFRLSSHQVSLLLSLIWVQATSAENGPANFEAMAHTYSIVLLFTRSKTSGHMALVRCFQLAFSLRSISLDTEGGLQPSRRRSLFTLASYMLIFSARAGSFPELIPKVKVSLTETTVDPFLELVDDVRLQAMYIEPGKVVYGSLEDDIAAGKSLSALQLDDKQLKETVKSYFLTKYSKLPEDELSSIKEQLLQGFSPDDAYPLGPPLFMETPRPCSPLAQIEFPDFNEIVAPVTLADEEIGPERGGSQSDRMSSLSIHNPDILSVNQLLESVLETARQVASVPISSAPVPYDQMKNQCEALVTGKQQKMSVLQSFKHQQETRALVLSSDYETKVPPLSNKTLEYSDVDLKLVSLEQFQPRYQVRPCSYDSLRLPPSSPYDKFLKAAGC* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0585 951 PANTHER CYCLIN-LIKE PROTEIN 1 951 - -
Amo13g0585 951 PANTHER PUTATIVE, EXPRESSED-RELATED 1 951 - -
Amo13g0585 951 SUPERFAMILY ARM repeat 73 486 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0585 Amo-Chr13 7400496 7408275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0585 K21842 - gmx:100817330 1459.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0618 19 9654143 9659965 Amo13g0585 13 7400496 7408275 PCT
Amo13g0585 13 7400496 7408275 Amo19g0618 19 9654143 9659965 PCT