Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0572 ATGGATCCTAAAGTACCAATAGAGGACCAATTTTCCAAGTTGCACCCTTCCTTCCCAGAAGGCATAAGAATTGGAATAGTTGGTGGTGGTCCAAGTGGCTTATCAGCAGCTTATGCACTTGCCAGGCTTGGTTACAAGAATGTCACAGTCTTGGAGAAGCATCACACAGTTGGTGGCATGTGTGAATCAGTAGACATTGAAGGAAAAGTATATGATCTAGGTGGGCAAGTTCTTGCTGCAAGCAGTGCTCCAATCATTTTTCACTTGGCAAAAGAGACAGGCTCAGCACTAGAAGAATTAGACTCTCACAAGCTTGCTATTATCAACCCTTCCAATGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATTCAGGAAAAGGTGAAGAATTCTGGTAGAATTGGGGTGCATGGAGTGAGTGACATTGCTCCAGAGTTGGCTCCAGAATATCTTGAATGTCATGGACTCAAATCTGTTCCTAAATCTGTGGCTTATGGCTACACTGCCTCAGGATATGGCTTTGTTCAAGATATTCCTTATGCATACCTTCATGAGTTCACTAGAACCTCCATGGCTGGAAAAATCCGAAGGTTTCGAGACGGATATACAAGTCTTTGGCAGAAGATTGCTCAATCACTTCCTTTGAAACTTTGCTGCAACACTGAAGTATTGACACTTAGAAGGAACTCTGATGGTGTCACAGTTAATGTCAAGAACTTAAATGGAGTTGAAACTTTGGTATTTGATAAGATCATAATCTCTGGTTCATTTCCATTGAAATATGGAAGAACTTATAGATCATTGCCTTCAACTTGCACAGATTGTGAACCTGAAGTAATGGATACAAGTGATCTTGAAAAAGATTTGTTCAGCAAAGTAGAAACAAATGACTACTACACTACTGTTTTGAAGATTAACAGACTTGATCATTTGCCTGTTGGATTTTATTATTTCAATGAATACATGGAAGATCCTAGCACAATTGGACATCCGGTTGCAATTCAAAAATTTTATGCAGACACTAACATATTCTTGCTTTGGTCCTATGGCAACTCTACTGATATTAAAGGACCTGCCGTCACAAAGCTTGCAATCAAGACAGTAGAATCCATGGGGGGAGAGGTTCAGAAAGTCGTTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTTAGTAGCCAAGCTATGAAAGATGGATTCTATGAAAAGTTGGAATCAGGACTTCAAGGTTCAAGGAATACTTACTATGTAGGTGGCCTTATGGCATTTGAGCTTACAGAGAGGAATTCATCTTATGCCATGGCTTTAATATGCAAGAACTTTGCAAATAGCAGTGATTTGCCAATGTATCCTTATACTAAGAGTTTGTTTCCATTGAGAACTGAGTGCCAAGAAATGGATCCTAAAGAGTTAAGTGAATTGCCAGGAGTGCATTTTCCTAATTTGCCTACTTTGGATGGCTATTTAAGGCAATGGGGAACTCATCCTATCACTCAAGACAGAACACTTTACACTTGGATTAATGAAGAAGGCGCACCGGTAGGCCAGAGGACTTATGCAGAACAACATCTTAATGCATCCTGCATTGCTCATAAGCTCTTAACATGCCAAAAGCCGGTTATCAAGCCTGGGGACAAGGTTCTTCTTGTTTATGTGCCTGGTCTAGACTTCATCGACGCCTTCTTTGGATGCCTAAGAGCTAGAGTCATACCAGTTCCAGTTCTTCCTCCGGATCCAATGCAAAGAAGTGGACAAGCACTAACAAAAATTGAAAACATTGCCAAGTCCTGCAGCATTGTGGCAATTTTGTCAACAGCTGCTTATCACTCGGCCGTCCGGGCAGGTTCATTGAAAAATTTTATCTCATTAACTGGGAAAAGTGGGAAGTCCTCAGCTCGCTGGCCGAATCTTCCATGGCTGCACACTGATACTTGGGTCAAGAATTCAAAAAGTTTGGCCTTGAATGGTCTAGATGATCAATGTGAAGAAGCTCAGCCTGGTGATATTTGTTTCTTGCAATTCACGTCTGGTTCGACCGGTGATGCTAAAGGAGTTATGATCACTCATGGTGGCCTTATTCACAATGTGAAGTTAATGAGAAGTAGATACAGGAGCACATCAAGAACAGTCCTAGTGAGTTGGCTCCCTCAGTATCATGACATGGGACTGATTGGGGGACTTTTTACATCTCTTGTCAGTGGTGGATCGGCGATTTTGTTTTCGCCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATGAGCAAATATCAAGCAACTCACAGTGCTGGCCCAAACTTTGCATTTGAGTTGGTGATTAGAAGGTTGGAGTCTGACAAAGACAAGCTTTGGAATTTAGACCTTTCATCCATGATTTTTCTTATGGTTGCTGCTGAACCGGTGAGACAAAAGACTTTGAAAAGATTTGTTGAGCTGACTAATCCTTTTGGATTATCCGAAAAGGTGATAGCTCCTGGATATGGCTTGGCAGAAAACTGTGTCTTTGTTAGTTGCGCATTCGGGGAACGAAAGCCTATCATTGTTGATTGGCAAGGAAAAGTTTGTTGTGGATATACTCAGCAAGAGAATGAAGATATTGACATAAGAATAGTTGATCCGGAGACATGTGAAGAGCTTCAAGAGGATGGAAAGGAGGGAGAGATTTGGTTTAGTAGCCCAAGTGCTGGAATAGGATACTGGGGAAGGGAAGAATTGAGTCAGAATACTTTCAAGAACAAACTTCGCAATCATCCTGGCCGTTACTACACAAAAACAGGAGACTTGGGAAGAATCATAGATGGAAAACTGTTCATCACTGGAAGAATCAAAGATCTCATCATTGTTGCTGGAAGGAACATCTACTCTGCAGATGTTGAGAAGACAGTTGAGACTTCATCAGAATTGCTTCGGCCTGGTTGTTGTGCTGTCATTGGTGTCCCAGAGGAAATCTTATCTGCAAAGGGGATTTCCATGCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAGGTTAGAGATGGAAAACCAGTTGGCAAAGATGTTATTGAGAAGATTCGGACTCGTGTGGTTGAAGAACATGGAGTTGGTGTTGCTTCTGTTAAGCTGGTCAAGCCTAGAACAATCAGCAAAACAACATCTGGAAAAATCAAGAGATTTGAATGTATCAAGCAGTTTGCAGATGAATCTCTGAACTTGGTTCCACAAGGTCCACAGACTCTATTGAAGAAAACTTTGCTAAGATCATATACTACCGGAACATGTGGCGAAGGGAATACTCCGAGGCCCCGGCTAGTAAGAAGAACACTTGCAGCCAGCAAAAGAATCAGTAAGAATGACATTGTGGAATTCTTGAAGGGCCTTATTTCTGAGCAAACTGGAATTCCAATCAACAACATCTCAGTTACAGATAACCTAACATCCTATGGAATTGATTCGATTGGTGTGGTTAAAGCAACTCAAAAGCTCTCGGATTTCCTTGGAACACCAGTTGCAGCCATTGATGTTTTCACTGCAACAAACATTCTAGAATTGGCAAACTTCTCTGAGGATCTGCTATCCAAGATTCAGCCTCAGCTTTCAAGCAATCCAACCAATGTTCCAGAAGCTGAAACTTTTTCTACTGAACTGGTTGAAGAGGTATCTACATCTAAGCGATTTGGTATCCATTTACTTCAAGTTATAGCACTTGTTTATATTTCCATCATGCTAGCCTCACCAGCTTATATATCCATCAATGCTTTCCTAAGCTTCATCCCAAGTTTCAGTATATCAGTAGATGGAATACCCTGGTCAAATTATTTGGTTTCCCTTGCTTTAGCACCTATTGCTTGGATTCTTTGCATTGCTGTTACTTGCATTTGCATTTCATTATTTGGAAATTCTTTCTTGAGGCCAAACTATGCTCTTGTCTCCGAAATCTCCTTGTATTCAATGGACTTTGTCAAATGGTGGGCATTATATAAGGTCCAAGAGATTTCTTCTAAAGTTCTAGCAGTTCACCTCAGAGGAACTGTGTTTTTGAAGTACTGGTTTGAGATGCTTGGTGCAAGGATTGGATCCTCAGTGTTGCTTGATACAGTTGACATTACCGATCCGAGTCTTGTTTCAATTGGAGATGAAGCTGTCATTGCAGAAGGTGTTTTGGTTCAAAGTCATGAGGTAAAAAGCAGAATTCTAAGTCTCCGTGCTATCAAGATTGGCAGAAGTTCCTCAATTGGACCTTATGCAGTTATTCAAAAAGGAAGTGTTATTGAAGAAGGTGCTGAGGTACAGGCCTTGCAAAAGGTTGAAGGAGGCCAGCCTGTGCTCAAATCTGCTAAGCTTAGTGATGTTGATAAGAATGCAGAAGTTCCTAGCTTTTACCACTTTATTGGGATCTATCTTGTTAGCTTTCTCAGTTCACTAGCTGCAGCTATTACCTACTTCATGTATATATGGTTCTCCAAGAAATCTCCATCATTCCTACACTTTTCATTTGTTTGCCTATGTGGTGCATTCCACTGGATCCCCTTCACCATTATTGCATATGCTACCATGTTTTCTGATGTACCATCAAATCCAATAACCTTTGCCATTTCATTTGCCGGCGCCTACTTACTTCATGGTCTTGTGCTCATAGCTCTCAGCAGCGCTTTCTCCAATCTCCTCATCATGTCCGGTATAAAGCAAAACCAATACAGAACTTGGCTTAAGCAACAAGTCACCATGTCATGCCACCTTAGATTCGCGAAGCTTCTCTCAGGAACAGGAGCCTTCTGTATTTATCTACGACTCTTGGGTGCGAAAATTGGCAAGCATTGTTCCATTAGAGCAATCAATCCCATTTCAAAGCCAGAATTAATGACAATCGGTGATGGTGTCCATCTAGGAGATTTCAGCAAGATAATTACTGGTTTTTACTCTTCCAGTGGATATACTTCTGGAAAAGTTGAAGTTCGGCATAATTCAGTTGTTGGCAGTCAAAGCCTAATTCTCCCAGGTTCTATTGTCCAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGTACTCTATACTCCAAGAGGGTGGTGTTTATATTGGATCACAATCCCAACCAGTTATCAGAAACACAATGAATAATTCTGATAAAAATATAGAAGAGATGGACACTGAATGTAACGAGAATGCTAACAATTTGGCGACAACATTGCATAAAAAGGACTCAGATAAAGTTACCTTGACCAGAACATGGTATCAAAGTTTCTCAGTACTCTTCATTCAACCCTTGATGCAAACATTTTTGCCTTATTTTGTGGTTGGTTTATCAGTTTTTGCACCTTTGGACCTTATTGTTCACAAAAAGAATGCCATGAATCTCTCGTTGCATTGGTTTTTCCCTATGGTTTGGGTTCTCTCTGGCACTCTAGCTGCATTGGCATGTGTTATAGCCAAAAGGGTTCTTGTAGGAAAGAACAAATCTGGAGAAAAAGTTCCCATATGGAGCACAAGGATCACCATGGACAGCACTTGGCAAGCCATAAGAACACTTGTTGGAGACTTTTTCATGGACATGACAAATGGCTCATATTTTCTTGTGTTGTATATGAAGCTGATGGGTGCAGATGTTGAAACGGATCACGAAGTTTATGTGGATAGCAATGGAGCATTGTTGAATCCTGAAATGGTGAAGATTGAAAGAGGTGGCTGTGTGGGAAAAGAAGCATTGCTGTTTGGACACATATATGAAGGTGAAGAAGGAGGAATGGTGAAGTTTGGAGATATCAAAATTGGAGAAGATGGTTTTGTTGGTAGCAGGGCTGTTGCCATGCCTGGTGTGCAGTTGGAGAATGAGGGAAATCTTGGTGCTCTATCTCTTGCCATGAAAGAAGAGATCATAAGGTCAAGGTGA 5913 0.4096 MDPKVPIEDQFSKLHPSFPEGIRIGIVGGGPSGLSAAYALARLGYKNVTVLEKHHTVGGMCESVDIEGKVYDLGGQVLAASSAPIIFHLAKETGSALEELDSHKLAIINPSNGEYQDIKVADDYVSVMSLTLEIQEKVKNSGRIGVHGVSDIAPELAPEYLECHGLKSVPKSVAYGYTASGYGFVQDIPYAYLHEFTRTSMAGKIRRFRDGYTSLWQKIAQSLPLKLCCNTEVLTLRRNSDGVTVNVKNLNGVETLVFDKIIISGSFPLKYGRTYRSLPSTCTDCEPEVMDTSDLEKDLFSKVETNDYYTTVLKINRLDHLPVGFYYFNEYMEDPSTIGHPVAIQKFYADTNIFLLWSYGNSTDIKGPAVTKLAIKTVESMGGEVQKVVLQRRFKYFPHVSSQAMKDGFYEKLESGLQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSSDLPMYPYTKSLFPLRTECQEMDPKELSELPGVHFPNLPTLDGYLRQWGTHPITQDRTLYTWINEEGAPVGQRTYAEQHLNASCIAHKLLTCQKPVIKPGDKVLLVYVPGLDFIDAFFGCLRARVIPVPVLPPDPMQRSGQALTKIENIAKSCSIVAILSTAAYHSAVRAGSLKNFISLTGKSGKSSARWPNLPWLHTDTWVKNSKSLALNGLDDQCEEAQPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSRYRSTSRTVLVSWLPQYHDMGLIGGLFTSLVSGGSAILFSPMTFIKKPLLWLETMSKYQATHSAGPNFAFELVIRRLESDKDKLWNLDLSSMIFLMVAAEPVRQKTLKRFVELTNPFGLSEKVIAPGYGLAENCVFVSCAFGERKPIIVDWQGKVCCGYTQQENEDIDIRIVDPETCEELQEDGKEGEIWFSSPSAGIGYWGREELSQNTFKNKLRNHPGRYYTKTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCCAVIGVPEEILSAKGISMPDGSDQVGLVVIAEVRDGKPVGKDVIEKIRTRVVEEHGVGVASVKLVKPRTISKTTSGKIKRFECIKQFADESLNLVPQGPQTLLKKTLLRSYTTGTCGEGNTPRPRLVRRTLAASKRISKNDIVEFLKGLISEQTGIPINNISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTATNILELANFSEDLLSKIQPQLSSNPTNVPEAETFSTELVEEVSTSKRFGIHLLQVIALVYISIMLASPAYISINAFLSFIPSFSISVDGIPWSNYLVSLALAPIAWILCIAVTCICISLFGNSFLRPNYALVSEISLYSMDFVKWWALYKVQEISSKVLAVHLRGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEAVIAEGVLVQSHEVKSRILSLRAIKIGRSSSIGPYAVIQKGSVIEEGAEVQALQKVEGGQPVLKSAKLSDVDKNAEVPSFYHFIGIYLVSFLSSLAAAITYFMYIWFSKKSPSFLHFSFVCLCGAFHWIPFTIIAYATMFSDVPSNPITFAISFAGAYLLHGLVLIALSSAFSNLLIMSGIKQNQYRTWLKQQVTMSCHLRFAKLLSGTGAFCIYLRLLGAKIGKHCSIRAINPISKPELMTIGDGVHLGDFSKIITGFYSSSGYTSGKVEVRHNSVVGSQSLILPGSIVQKNVILGALSVAPMYSILQEGGVYIGSQSQPVIRNTMNNSDKNIEEMDTECNENANNLATTLHKKDSDKVTLTRTWYQSFSVLFIQPLMQTFLPYFVVGLSVFAPLDLIVHKKNAMNLSLHWFFPMVWVLSGTLAALACVIAKRVLVGKNKSGEKVPIWSTRITMDSTWQAIRTLVGDFFMDMTNGSYFLVLYMKLMGADVETDHEVYVDSNGALLNPEMVKIERGGCVGKEALLFGHIYEGEEGGMVKFGDIKIGEDGFVGSRAVAMPGVQLENEGNLGALSLAMKEEIIRSR* 1971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0572 1970 Pfam Phosphopantetheine attachment site 1129 1193 IPR009081 -
Amo13g0572 1970 SUPERFAMILY Trimeric LpxA-like enzymes 1803 1963 IPR011004 -
Amo13g0572 1970 Gene3D - 1113 1196 IPR036736 -
Amo13g0572 1970 SMART Phosphopantetheine attachment site 1127 1198 IPR020806 GO:0031177
Amo13g0572 1970 PANTHER AMINE OXIDASE 1 1738 - -
Amo13g0572 1970 PANTHER AMINE OXIDASE 1734 1970 - -
Amo13g0572 1970 Pfam Flavin containing amine oxidoreductase 32 266 IPR002937 GO:0016491
Amo13g0572 1970 Gene3D Hexapeptide repeat proteins 1360 1462 - -
Amo13g0572 1970 Gene3D - 481 953 IPR042099 -
Amo13g0572 1970 Gene3D Hexapeptide repeat proteins 1596 1743 - -
Amo13g0572 1970 Pfam AMP-binding enzyme 523 959 IPR000873 -
Amo13g0572 1970 ProSitePatterns Putative AMP-binding domain signature. 681 692 IPR020845 -
Amo13g0572 1970 CDD FAAL 499 1073 IPR040097 GO:0008610
Amo13g0572 1970 SUPERFAMILY ACP-like 1122 1199 IPR036736 -
Amo13g0572 1970 Gene3D - 94 202 - -
Amo13g0572 1970 PANTHER AMP-BINDING ENZYME 1734 1970 - -
Amo13g0572 1970 PANTHER AMP-BINDING ENZYME 1 1738 - -
Amo13g0572 1970 Gene3D - 23 446 IPR036188 -
Amo13g0572 1970 Gene3D - 303 396 - -
Amo13g0572 1970 PRINTS Adrenodoxin reductase family signature 23 45 - -
Amo13g0572 1970 PRINTS Adrenodoxin reductase family signature 47 60 - -
Amo13g0572 1970 ProSitePatterns Phosphopantetheine attachment site. 1153 1168 IPR006162 -
Amo13g0572 1970 SUPERFAMILY FAD/NAD(P)-binding domain 20 271 IPR036188 -
Amo13g0572 1970 SUPERFAMILY Trimeric LpxA-like enzymes 1603 1688 IPR011004 -
Amo13g0572 1970 SUPERFAMILY Trimeric LpxA-like enzymes 1348 1445 IPR011004 -
Amo13g0572 1970 Gene3D - 954 1081 IPR045851 -
Amo13g0572 1970 SUPERFAMILY Acetyl-CoA synthetase-like 493 1078 - -
Amo13g0572 1970 ProSiteProfiles Carrier protein (CP) domain profile. 1124 1198 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0572 Amo-Chr13 7234585 7241407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0572 677 992 Monolignol Biosynthesis Gene Families AT1G20480 27.129 2.15e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0572 - - adu:107477067 3614.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0572 13 7234585 7241407 Amo13g0572 13 7234585 7241407 ECH