Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0550 AGGTGTAAGCAGAGGGATCATCACAAAGAAACAATGGAGACTTTTGAGAAAGAAATGAATGGTATGAAGGAGTATTATGGGAGTGGAGAGACAAAGAAAGTGTCATGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCATTGAAAAAGAAGAAGATATTTTGAAGGCCTTAATGCTTGACTTAGGAAAGCATCATGTTGAAGCTTTTAGAGATGAGATAGGAACTTTGATGAAGTCTTTGAATTTTGCATTGAGTAACTTAAAATATTGGATATCAGGCAAAAAGGCTAAATTGCCACAAATAGCACTGCTTAGTAGTGCAGAAATTGTTCCTGAACCTCTGGGCCTAGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGTTTATCCTTGGAGCCACTAATAGGAGCAGTAGCAGCTGGAAACACAGTGGTCTTAAAGCCTTCAGAGTTRTCACCAGCATGTTCTTCCATACTTGCCCTTGGACTTCCCAATTTCTTGGACAACAAAGCCATTAAGGTTGTACAAGGTGGACCCCATGAATCTCAGCACCTTCTCCAGMAAAAATGGGACAAAATCTTCTTCACAGGAAGTGCACGTGTGGGGAAGATTGTGATGTCAGCAGCAGCGAAGCATTTGACTCCTGTGACTTTGGAGTTGGGTGGAAAATGTCCTGCAGTTGTTGATTCACTTTCATCTTCTTGGGACTTGGAGGTAACGGTGAAGCGGATTCTAGTGGGAAAATATGGGGCATGTGGTGGTCAAGCATGCATAGCAATTGACTATGTCCTCGTGGAAAATCAATACTATCCAAAACTGGTAGAATTGATGAAACTATGGATCAAGAAAATGTTTGGGGAGAACCCAAAAGACTCCAACACCATTGCAAGGATAGTTAATAAACAACACTTGTCTAGATTGAARAATCTTTTGGCTGATCCAGAGATCAAGAAATCTGTGGTTTATGGAGGCTMTATGGACGAAAGAAACTTATTTATTGAGCCAACAATCTTGTTGAATCCCCCACTTGAATCAGCAATCATGACAGAAGAAATTTTTGGYCCATTGCTTCCAATTATTACTGTGGACAAAATTGAARACAGTATTAAATTCATAAGCTCTAGGCCTAAGCCTCTTGCACTCTATGTCTTTTCCAAAGATAAGACACTGCAGAATAGAATGATATCTGAAACATCTTCTGGCAGTTTAACTTTCAATGATGCAATTCTACAATATGCAGCGGATTCTCTACCATTTGGTGGAGTTGGAGAAAGTGGATTTGGAATGTACCATGGGAAGTTCTCTTTTGAYACATTCAGCAGCCAWAAGGCAGTAGTTAGAAGAAGCTTCCTCACTGATTTCTGGTATAGGTATCCACCATGGACACTGAACAAGTTTCAGCTTCTTGAGGTCTCTTACAACTATGATTATCTGGGGTTGCTCCTTGTCTTGCTTGGCCTAAAGACACCATCAAAACGCAGATCATATTTCGCTAACCCTGATTACTTTCACCATCGCTAG 1527 0.4034 RCKQRDHHKETMETFEKEMNGMKEYYGSGETKKVSWRESQLKGLRRFLIEKEEDILKALMLDLGKHHVEAFRDEIGTLMKSLNFALSNLKYWISGKKAKLPQIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSELSPACSSILALGLPNFLDNKAIKVVQGGPHESQHLLQXKWDKIFFTGSARVGKIVMSAAAKHLTPVTLELGGKCPAVVDSLSSSWDLEVTVKRILVGKYGACGGQACIAIDYVLVENQYYPKLVELMKLWIKKMFGENPKDSNTIARIVNKQHLSRLKNLLADPEIKKSVVYGGXMDERNLFIEPTILLNPPLESAIMTEEIFGPLLPIITVDKIEXSIKFISSRPKPLALYVFSKDKTLQNRMISETSSGSLTFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSSXKAVVRRSFLTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKTPSKRRSYFANPDYFHHR* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0550 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 445 IPR016162 GO:0016491
Amo13g0550 508 SUPERFAMILY ALDH-like 24 464 IPR016161 GO:0016491
Amo13g0550 508 PANTHER ALDEHYDE DEHYDROGENASE 14 498 IPR012394 GO:0006081
Amo13g0550 508 Pfam Aldehyde dehydrogenase family 12 447 IPR015590 GO:0016491
Amo13g0550 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 427 IPR016163 GO:0016620
Amo13g0550 508 PIRSF ALDH 3 483 IPR012394 GO:0006081
Amo13g0550 508 PANTHER ALDEHYDE DEHYDROGENASE 14 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0550 Amo-Chr13 6979275 6982120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0550 13 490 Aldehyde Dehydrogenase Gene Family AT4G36250 52.929 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0550 K00128 - gmx:100817701 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0550 13 6979275 6982120 Amo13g0550 13 6979275 6982120 ECH