Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0548 ATGGCAAGGTGCGAAGCTGAAGCCATTACTGGCTTCCTACCCAGAAACGCGTGGCAGCTTCTCTCCATTTTCATGGCGACTATCGTCGGCATCATCACGCAGCCGCTTCCGCTGGGGGCTGTTGCTATCATGGGTTTATGCACCGCCGTGCTCACCAAAACGCTAACATACGCCGCGGCRTTCTCGGCCTTTGGTGACCAGATACCTTGGCTGGTGGCKCTGGCTTTCTTCTTCGCCAAAGGKTTCATCAAAACCGGGTTAGGAACGAGAATCGCGTACCACGTGGTGTCACTCGCCGGAAGCTCCTCCCTTGGATTAGGATACAGCTTGGTGTTGAGCGAAGCATTGCTTGCACCAGCCATACCTTCAGTTTCAGCAAGAGCAGGTGGGATCATACTCCCATTAGTGAAGTCTCTGAGCGAAGCATGTGGCAGCAACGTTGGCGATGGAACCGAGAGCAAGCTAGGCTCATGGCTCACTCTAACCTGCTTCCAAACCTCCGTGATCTCTTCTGCCATGTTCCTGACTGCCATGGCCGCCAACCCTCTGTGCGGGACGCTGGCGCGTGGGGCCATAGGGAGGGGGATTGGATGGAGCGATTGGGCCGTGGCGGCGGCTGTGCCGGGTGCGGTGTCATTGGTTGTTGTGCCGTTGATCTTGTACGTGATTTACCCGCCGGGCGTAAAGAATAGCCCTGATGCTCCAAGGGTTGCTAGGGACAAGTTGCAACTTATGGGACCTATGACTCTCAACGAAAACATCATGGCTGCTACTCTCTTCCTTACGCTGGGCCTTGTGGCCCAAAAAAGTCTTTGA 816 0.5527 MARCEAEAITGFLPRNAWQLLSIFMATIVGIITQPLPLGAVAIMGLCTAVLTKTLTYAAAFSAFGDQIPWLVALAFFFAKGFIKTGLGTRIAYHVVSLAGSSSLGLGYSLVLSEALLAPAIPSVSARAGGIILPLVKSLSEACGSNVGDGTESKLGSWLTLTCFQTSVISSAMFLTAMAANPLCGTLARGAIGRGIGWSDWAVAAAVPGAVSLVVVPLILYVIYPPGVKNSPDAPRVARDKLQLMGPMTLNENIMAATLFLTLGLVAQKSL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0548 271 Pfam Sodium:sulfate symporter transmembrane region 13 264 IPR001898 GO:0016020|GO:0022857|GO:0055085
Amo13g0548 271 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 13 265 - -
Amo13g0548 271 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 13 265 IPR030676 -
Amo13g0548 271 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 13 266 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0548 Amo-Chr13 6952828 6953819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0548 15 265 Antiporters AT5G12860 78.884 2.30e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0548 - - ahf:112788826 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0548 13 6952828 6953819 Amo13g0548 13 6952828 6953819 ECH