Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0547 ATGGCCTCCATAGCYCTCTCCGCCACCACTCTCCCCTCCCTACGCCTCCGCTCCCTCTCCCCCAAACCCAAACCACTCCTCCATTCCCTTCCCACCACTTCCACCACCTTCAAACCCCTCACTCTTAAACCACGYTCTTTCAATCTCATCACCTCCATTTCCAATGCTCCTTTCAAATCTAATCGCGCACATTCTACCGTCGTAGCCTCCGTCGCTGGTACAGCTTCCATTACGTCAGCATCTCCGCCACCTCCACCTCCTCAGCCATGGCAAGGGGCCTCCATGAAGCCCTTACTCGCCTCCATAGCCATCGGCGTCCTCGTCTGGTACTCTCCCGTCCCCGCCGGCGTCTCTCGTAACGCATGGCAGCTCCTCGCAATCTTCCTCGGCACCATCGTCGGGATCATCACGCAGCCGCTACCTCTCGGTGCCGTCGCCCTCCTCGGACTCGGCGTCTCCGTCCTTACTAAAACCCTTCCATTCCCCGCGGCGTTCTCAGGCTTTGGCGACCCGATCCCGTGGCTCATCTGCCTCGCCTTCTTCTTCGCCAAGGGATTCATCAAGACCGGCCTCGGTAACCGCGTCGCGTACCAGTTCGTCTCACTCTTCGGAAGCTCCTCGCTAGGGTTAGGGTACAGCTTGGTCTTCAGCGAAGCGCTTCTCGCGCCAGCGATTCCCTCGGTTTCAGCGCGCGCCGGTGGAATTTTCCTGCCACTTGTGAAGGCTCTCTGCGTTGCATGCGGAAGCAACGCTGGCGACGGGACGGAGAATCGCTTGGGGTCGTGGCTCATGCTGACGTGTTTTCAGACGTCGGTGATCTCGTCGGCGATGTTCCTGACGGCGATGGCGGCGAACCCGCTATGTGCAACTCTGACTCAGAATGCGATTAACAAGACTATTGGGTGGGTGGATTGGGCTAAGGCTGGGATCGTTCCGGGCCTGGTTTCATTGGTGTTGGTGCCGTTGATACTGTATGTTATCTACCCGCCCGGGATGAAGAGTAGCCCCGACGCGCCGAAGCTTGCAAGGGAGAGGTTGCAGAAGATGGGACCTATGACTTCGCATGAGAAGATCATGACATTGACACTGCTTCTTACGGTAGGACTTTGGGTCTTTGGAGGGGTTCTTAATATTGATGCTGTCACTGCTGCCATTCTTGGATTATCTGTACTCCTTGTCACTGGGGTCGTAACATGGAAGGAGTGCTTGGCTGAGGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATTGCCATGGCTGGATATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACTGTGGTCAAGTTTGTTGGTGGATTGGGTCTCTCTTGGCAACTATCTTTTGGAATCCTTGTCCTCCTCTACTTCTACTCTCACTACTTCTTTGCAAGTGGGGCTGCTCATATAGGTGCCATGTTCACTGCTTTCTTGTCTGTCGCCACTGCTCTGGGAACTCCACCATTCTTTGGAGCCATGGTGCTTTCCTTCCTCTCCAACCTCATGGGCGGCCTTACTCATTATGGGATTGGATCAGCCCCTGTATTTTACGGCGCCAACTATGTTCCACTCGCCAAATGGTGGGGCTACGGATTCCTCATCAGTATTGTTAACATTGTAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1683 0.546 MASIALSATTLPSLRLRSLSPKPKPLLHSLPTTSTTFKPLTLKPRSFNLITSISNAPFKSNRAHSTVVASVAGTASITSASPPPPPPQPWQGASMKPLLASIAIGVLVWYSPVPAGVSRNAWQLLAIFLGTIVGIITQPLPLGAVALLGLGVSVLTKTLPFPAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNAGDGTENRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTQNAINKTIGWVDWAKAGIVPGLVSLVLVPLILYVIYPPGMKSSPDAPKLARERLQKMGPMTSHEKIMTLTLLLTVGLWVFGGVLNIDAVTAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNIVIWLGLGGVWWKAIGLW* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0547 560 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 45 560 IPR030676 -
Amo13g0547 560 Pfam Sodium:sulfate symporter transmembrane region 96 560 IPR001898 GO:0016020|GO:0022857|GO:0055085
Amo13g0547 560 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 45 560 - -
Amo13g0547 560 CDD ArsB_NhaD_permease 132 554 - -
Amo13g0547 560 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 112 554 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0547 Amo-Chr13 6949576 6952747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0547 1 559 Antiporters AT5G12860 77.580 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0547 - - gmx:100793559 852.818