Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0542 ATGGATCATGACATGGGCATGGCAGCACCACCGCCATCCACCATGGTGATGATGAAGCGCCGCCATTTCATGCACATGACATTCTTCTGGGGGACAAAGTCTGAGGTTCTGTTCGACGAATGGCCTGGGGACAGCCGTGGCATGTACGCGCTCGCTCTGCTCTTTGTTTTCGTCATGTCCTTCCTGGTGGAGTGGCTGTCCCACACCCGGTTTATGAAACCCGGTTCCAACAAGCTCAGTGCCGGTTTGGGTCAGACCGTGTTACACCTCCTTAGAGTTGGTTTGGCATACCTCGTTATGCTTGCTCTCATGTCGTTCAACGCCGGTGTCTTCTTGATGGCTGTGTTGGGGCTTTCGCTAAACCACACAACGATAAGAGATATGATGATCTTCCGCCAATGTCTTAATCATGAGGAAATGCATGATGGCAATAAGCAGCAGCATTTCATGCACATGACATTCTTCTGGGGGACAAAGTCCGAGGTTCTGTTCGCCCAATGGCCTGGAGACAGCCAGTATTGGATGTACGCACTCGCTCTGCTCTTTGTCTTCGTCATGTCCTTCCTTGTCGAGTGGCTCTCCCACACACGCTTCACCAAACCCGGTTCCAGAAACATTGTTGCCGGTCTGGTTCAGACCTTGCTGTACCTCCTTAGAGTTGGTTTGGCCTACCTTGTTATGCTGGCGCTCATGTCTTTTAATGGTGGTGTGTTCTTGGTCGCTGTGCTCGCTCACGCTCTTGGCTTCTTCTTGTTCCGTAGCAGGGCTTTTTCTAAACCGCCAAATCATGATCTTCCTCCAATGTCTTGTTAA 813 0.5105 MDHDMGMAAPPPSTMVMMKRRHFMHMTFFWGTKSEVLFDEWPGDSRGMYALALLFVFVMSFLVEWLSHTRFMKPGSNKLSAGLGQTVLHLLRVGLAYLVMLALMSFNAGVFLMAVLGLSLNHTTIRDMMIFRQCLNHEEMHDGNKQQHFMHMTFFWGTKSEVLFAQWPGDSQYWMYALALLFVFVMSFLVEWLSHTRFTKPGSRNIVAGLVQTLLYLLRVGLAYLVMLALMSFNGGVFLVAVLAHALGFFLFRSRAFSKPPNHDLPPMSC* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0542 270 PANTHER COPPER TRANSPORTER 6-LIKE 2 121 - -
Amo13g0542 270 PANTHER COPPER TRANSPORTER 6-LIKE 143 269 - -
Amo13g0542 270 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 143 269 IPR007274 GO:0005375|GO:0016021|GO:0035434
Amo13g0542 270 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 2 121 IPR007274 GO:0005375|GO:0016021|GO:0035434
Amo13g0542 270 Pfam Ctr copper transporter family 79 120 IPR007274 GO:0005375|GO:0016021|GO:0035434
Amo13g0542 270 Pfam Ctr copper transporter family 26 71 IPR007274 GO:0005375|GO:0016021|GO:0035434
Amo13g0542 270 Pfam Ctr copper transporter family 205 252 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0542 Amo-Chr13 6859798 6865313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0542 153 270 Inorganic Solute Cotransporters AT5G59030 53.600 4.48e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0542 K14686 - rcu:8279809 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0542 13 6859798 6865313 Amo13g0542 13 6859798 6865313 ECH