Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0518 ATGGCTGCAAAACTTGATGGTGGAGCTTATCTCACTTCTTTCGTTGATGCTGTTTTAGACAAGTTGTCTTCAATACTTGAAGATGACTCTGTCCTCGACTCTGTCCTGGAGTTGCTTGAAAGGTTGCAGAATAGTCTGTATGATGCTGGACCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTTTATTTTGCTGATGACTTGCTTGATGAACTCTCCACTAAGGCCGCCATCGCGGCCACTCAAGGGGATTCAGGTAACTCTTCTTCCTGGTCTCGTCTTGTTGATTCATACATTGATGATAGTGGTGTCAATGTCATCAAAAAAATAGTTGGCAAACTACAGTCTCTTGTAGAACGAAAAGCTAAACTTGGTCTAGAAAAGAGTGCCAAGTTGGACACATCATGGAGAATTCCATCCACATCTCTCGTTGTAAGTTCTGACATATTCGGAAAAACTGCTCTAGCTCAACTGGTTTACAGTGATGCCAAAGTAGTGGGAAAATTTGACACTAGAGTATGGCCTTATGGGTATGATGTCTGGCATGATCAACAAGACATTTGGGAGGATCTTCTAAAACCTTATCGCTACGGCAATCACGGAAATTGCTGGTTAGTATTTTCAAAACACGCAAGTCTTTCTGCTGATTCTATGATGAATCCAACTCTGGAAAAAGTCGGCAAAGATATTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGTTCAAGCACTCGGAGGCTTATTGCGTGGAAATTCTGAAGTCAAGTCTTGGAATCATATATTGAAGAACGAGATCTGGAAATCCTCCAATGACAAGATAAAAATTGTTCCAGCCTTAAGAAGTCTCTTACAACCAGTAGGAGAAAAGACTCTAGAAGAAGTTGGTGACGAATATTTTGATGAATTATTTGTGAGGTCATTTTTCCAACCTCATAGTACTAATGACAAGACATTTGTGATGCATGATCTTGTACATGATTTGGCAATGATCTATGCTGGAGAATTCTGTTTTAGAGCAGAAGAGCATGAAAATGCTGTTGAGATTGATATTAAAGCTCGTCATTTATCACATAATGCTACAGGCAATTATCCAATCTCAAAACTTCTAGGAGTTTGTGATAGAGTAGAACATACAAGGACATTTCTTGAAATCAATTTGTCACCAAATATCCCATTTGACATGGAAAACACACCTTGTATCTTGTTGTCAAAATTGAAGCGCCTTAGAGCTTTGTCATTCAAATGCTTTCCTCTTGAATCACTTCCTGATTCAATAGGTGAGTTGATTCATCTGCGTTACTTGGATCTCTCTGGAACCTACATTGTGACATTGCCCGAGTCTTTGGGTAATCTTTACAATTTGCAGACCTTGAAGCTGATTGGATGTGAAAAATTGAAAATGCTTCCGGATGGCATGCAAAATCTTGTAAATTTAAGGCATCTTGATATTAGAGCAACTTGTTTGCGCGAGATGCCGAAAGGCATGAGCAAATTGAAAAGTTTGCAGTTTTTAAGCGACTTTGTTGTTGGGAAGCATGAAGAGAACAAGATCAAAGAATTGGGAGCACTTGCGAATCTGCGCAAATCAATTTCCATTGACAAATTGGAGAACGTGGTCGACAGCAGTGAAGCTTGGGAGGCAAGAATGTTCGATAAGGATGGCATTGACTCTTTGAAGTTGATTTGGTCATCAAATAAAAGTAGGGATGGAGTTTTTGCTTTTGGTGTCAAAAAGAAGGATGCAGCTGATTCCCAAATTGAAAGAGATATACTTGACAAGTTACAACCTCACAGTAATTTGAAAGAAGTAGAGATCAGTGGTTACAGAGGCACAACATTTCCAGATTGGTTGGGAAATTCTTCCTACCACAACATCACCACACTAACCCTGCAACATTGCAAGAAATGTTCTGTGCTTCCTTCATTTGGACAATTGCCTTCTTTGAAGCACCTTACAATTTCAGATTTTAAAAGTCTGAAAACTGTGGGTGCTGAGTTTTACAAGGGTGGATCTTGTTTGGAGACACCATTTCCAGTTCTTGAAACTTACATTTTGCTCAATTAG 2109 0.3969 MAAKLDGGAYLTSFVDAVLDKLSSILEDDSVLDSVLELLERLQNSLYDAGPVLDDAEQKQFTDKRVKKWLVDLQDALYFADDLLDELSTKAAIAATQGDSGNSSSWSRLVDSYIDDSGVNVIKKIVGKLQSLVERKAKLGLEKSAKLDTSWRIPSTSLVVSSDIFGKTALAQLVYSDAKVVGKFDTRVWPYGYDVWHDQQDIWEDLLKPYRYGNHGNCWLVFSKHASLSADSMMNPTLEKVGKDIVKKCDGLPLAVQALGGLLRGNSEVKSWNHILKNEIWKSSNDKIKIVPALRSLLQPVGEKTLEEVGDEYFDELFVRSFFQPHSTNDKTFVMHDLVHDLAMIYAGEFCFRAEEHENAVEIDIKARHLSHNATGNYPISKLLGVCDRVEHTRTFLEINLSPNIPFDMENTPCILLSKLKRLRALSFKCFPLESLPDSIGELIHLRYLDLSGTYIVTLPESLGNLYNLQTLKLIGCEKLKMLPDGMQNLVNLRHLDIRATCLREMPKGMSKLKSLQFLSDFVVGKHEENKIKELGALANLRKSISIDKLENVVDSSEAWEARMFDKDGIDSLKLIWSSNKSRDGVFAFGVKKKDAADSQIERDILDKLQPHSNLKEVEISGYRGTTFPDWLGNSSYHNITTLTLQHCKKCSVLPSFGQLPSLKHLTISDFKSLKTVGAEFYKGGSCLETPFPVLETYILLN* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0518 702 Gene3D - 15 117 - -
Amo13g0518 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 294 IPR027417 -
Amo13g0518 702 Gene3D Ribonuclease Inhibitor 388 696 IPR032675 -
Amo13g0518 702 PANTHER DISEASE RESISTANCE PROTEIN RP 35 189 IPR044974 GO:0006952
Amo13g0518 702 PANTHER DISEASE RESISTANCE PROTEIN RP 303 697 IPR044974 GO:0006952
Amo13g0518 702 Pfam NB-ARC domain 217 278 IPR002182 GO:0043531
Amo13g0518 702 Gene3D - 214 294 IPR042197 -
Amo13g0518 702 PANTHER DISEASE RESISTANCE PROTEIN RP 217 295 IPR044974 GO:0006952
Amo13g0518 702 CDD RX-CC_like 13 135 IPR038005 -
Amo13g0518 702 PANTHER OS05G0414200 PROTEIN 35 189 - -
Amo13g0518 702 PANTHER OS05G0414200 PROTEIN 303 697 - -
Amo13g0518 702 PANTHER OS05G0414200 PROTEIN 217 295 - -
Amo13g0518 702 Pfam Rx N-terminal domain 14 94 IPR041118 -
Amo13g0518 702 SUPERFAMILY L domain-like 334 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0518 Amo-Chr13 6616651 6619210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0518 433 516 WRKY Transcription Factor Family AT4G12020 36.471 4.46e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0518 - - aip:110262366 818.15