Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0511 AACTTTATCCTTCATAAAGCCATGGCAGCCATAAGTCTCCGGAAGGGTAACACCCGTCTTCCGCCGGAAGTGAACCGCGTCCTCTACGTCCGAAACCTACCTTTCAACATCACCAGCGAAGAGATGTACGACATCTTCGGAAAATACGGCGCCATTCGCCAGATCCGAATCGGCACTAACAAGGACACTCGCGGCACCGCCTTCGTCGTCTACGAGGATATCTACGACGCCAAGACCGCCGTCGACCACCTCTCCGGTTTCAACGTTGCGAATCGGTACCTTATTGTTCTGTATTACCAGCAAGCGAAGATGAGCAAGAAGTTCGATCAGAAGAAGAAGGAGGATGAGATTACGAAGATGCAGGAGAAGTACGGTGTCTCCACCAAAGATAAGTAG 396 0.5101 NFILHKAMAAISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEITKMQEKYGVSTKDK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0511 131 PANTHER SPLICING FACTOR 3B 12 123 - -
Amo13g0511 131 SUPERFAMILY RNA-binding domain, RBD 12 109 IPR035979 GO:0003676
Amo13g0511 131 PANTHER SPLICING FACTOR 3B SUBUNIT 6 12 123 - -
Amo13g0511 131 Gene3D - 22 128 IPR012677 -
Amo13g0511 131 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 26 101 IPR000504 GO:0003723
Amo13g0511 131 SMART rrm1_1 27 97 IPR000504 GO:0003723
Amo13g0511 131 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 94 IPR000504 GO:0003723
Amo13g0511 131 CDD RRM_SF3B14 24 100 IPR034150 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0511 28 120 Eukaryotic Initiation Factors Gene Family AT2G36660 31.579 2.02e-07 46.6