Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0472 ATGGGTGAGGAAGTTAGGATGACCGACTACCAAGACGACGACWGAGTCGCCGACTGGGAATTGGGCCTTCCGGCGGRCCARGATCTCACCCCGCTCTCTCAGCTCTTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTCGCCGGAGCCACACCGTTCCCTTGTCGACGTRAACCGCGCCTCAAAGAACACTRTCTCCACCCTCCGTACCGGCGTCAACGCCTTCTCCTCCTCCAACCTCAACCCCTTCCAAGACGAGGGAAACGATCCCGCCGGKGACGACGAGGAAGAGATCGSTCCGGKCGGTTCGGGKTCCAATTCGAGGAAGCTCCGGAAGGTRGATTGTGCGGAGGAAGCGGATTCTGTGCCGCGCACCGACAGTGCRGCCGCCGTGAAGCGACCGAGGCTTGTGTGGACACCGCAGCTGCACAAGCGATTRGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTGCCGAAGACGATCATGCAGCTTATGAACGTGGAAGGGTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGTATCGCCTCTATCTTAAGCGGATGCAAGGGCTCTCCGCCGACGGACCTTCTTCCTCCGACCACCTCTTCGCCTCCACGCCGGTTCCTCAAAGCCTCAATGACAGCGGCGGAGGAGGAGCAGGAGGAGGTGGAAGTGGCCACTCCCGTGGGAACGGGCACCTTCCGGTTCCGGTCCCGATGCATTATCCTCCGGCGGCAATGATGCCAATGCCGATGCTCYGCATGCCACATGGCTTTCATCATCACCATGTGTTGCAGCAGAGGGATTGGTCCTACCCACCACATGTCACTCCTAATGATAAATGA 858 0.5956 MGEEVRMTDYQDDDXVADWELGLPAXQDLTPLSQLLIPPELASAFSISPEPHRSLVDVNRASKNTXSTLRTGVNAFSSSNLNPFQDEGNDPAGDDEEEIXPXGSGSNSRKLRKVDCAEEADSVPRTDSAAAVKRPRLVWTPQLHKRLVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSADGPSSSDHLFASTPVPQSLNDSGGGGAGGGGSGHSRGNGHLPVPVPMHYPPAAMMPMPMLXMPHGFHHHHVLQQRDWSYPPHVTPNDK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0472 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 275 - -
Amo13g0472 285 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Amo13g0472 285 Gene3D - 131 193 - -
Amo13g0472 285 SUPERFAMILY Homeodomain-like 132 191 IPR009057 -
Amo13g0472 285 Pfam Myb-like DNA-binding domain 138 186 IPR001005 -
Amo13g0472 285 MobiDBLite consensus disorder prediction 199 217 - -
Amo13g0472 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 190 IPR017930 -
Amo13g0472 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 275 IPR044841 GO:0003700|GO:0006355
Amo13g0472 285 MobiDBLite consensus disorder prediction 199 245 - -
Amo13g0472 285 MobiDBLite consensus disorder prediction 69 86 - -
Amo13g0472 285 MobiDBLite consensus disorder prediction 69 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0472 Amo-Chr13 6128583 6129842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0472 1 265 G2-like Transcription Factor Family AT3G46640 51.903 1.42e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo13g0472 Myb_DNA-binding 8.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0472 - - zju:107411020 323.553