Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0462 ATGGAGCTAGAAGAAGCTCCAGTCTTGGAAGAAGAGTCCAAGCTGGAAATTGAGATACACAGTGTCTCTAAGGAATCCGATGTTCCTCCAATAATTGTCAAGTCAGTATGCGATTCTGTTTGCCCTTTTTCCAGGGACGAGAACAGTTTGGTGGCGTCCAAGGAGTCATCGAAATCAGCAAAGAAACTCTGTGGACTCATAGCTTTTTATGCCATTGTTATGCTTGTGGAAGCATTTGGTGGAATAAAGGCCAACAGCCTAGCTGTTATCAGCGATGCGGCACACGTGCTTTCTGATATCGGAGGATTCTGCATCTCTCTCTTTGCAGTATGGGCTTCTGGCTGGGATGCAACACCGCATCAGTCTTTTGGATACAATAGACTTGAGGTTTTGGCTGCACTTTTATCTGTGCAGATAATTTGGGGGATATCTGGTTTTTTAGTATACGAAGCAATAGGTCGACTTGTGCATCGCAGCGCCAGGGTGAATGGAACGCTCATGTTTGCAATTGCAGCATTTGGTTTTGTGTTTAACTTTATCATGGTTGTATGGCTTGGTCATGATCATAGTCATAGTCATGACCATCATCATGGTCACAATCATAGTCATCATCATCATCATCATCATGATTGTGGACACTTGGATCATGATCATGGGAAGGAGGAACTAGCTAAAGTAACTGATGAAGAGGACCTTAACCTTCTTTCAAGTAATCAGAGAAATGTTAATGCCTTGAACATAAATCTGCAGGGTGCCTATTTGCATGTGATTACAGATATGATTCAATCTATCGGAGTGATGATTGCTGGAGCCATAATATGGGCTAAACCAGAATGGTTGGTGGTTGATCTTGTATGTACACTCATATTCTCTGTTATATCTTTGGGAACTACCATGCCTATGCTTAGGAGTATTTGTGGCATTCTTATGGAAAGGACACCAAGTGAGATCAATGTCATGAAACTAGAAAATGACCTCAGAAGTTTGAAGGGGGTGCAAGYTATTCATGACCTGCACGTTTGGGCCATAACAGTTGGAAAAACTGTTCTATCTTGTCATGTAGTAGCTGAYTCTGGCATAAATTCCATTGATTTACTTGGCAGGATTAGATATCATTGTGAGAAAACATATAAAATACAACATGTAACCGTACAAATTGAGTGA 1164 0.4124 MELEEAPVLEEESKLEIEIHSVSKESDVPPIIVKSVCDSVCPFSRDENSLVASKESSKSAKKLCGLIAFYAIVMLVEAFGGIKANSLAVISDAAHVLSDIGGFCISLFAVWASGWDATPHQSFGYNRLEVLAALLSVQIIWGISGFLVYEAIGRLVHRSARVNGTLMFAIAAFGFVFNFIMVVWLGHDHSHSHDHHHGHNHSHHHHHHHDCGHLDHDHGKEELAKVTDEEDLNLLSSNQRNVNALNINLQGAYLHVITDMIQSIGVMIAGAIIWAKPEWLVVDLVCTLIFSVISLGTTMPMLRSICGILMERTPSEINVMKLENDLRSLKGVQXIHDLHVWAITVGKTVLSCHVVADSGINSIDLLGRIRYHCEKTYKIQHVTVQIE* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0462 387 Gene3D Cation efflux protein transmembrane domain 59 309 IPR027469 -
Amo13g0462 387 SUPERFAMILY Cation efflux protein transmembrane domain-like 60 311 IPR027469 -
Amo13g0462 387 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 315 387 IPR036837 -
Amo13g0462 387 PANTHER METAL TOLERANCE PROTEIN B 1 387 - -
Amo13g0462 387 Pfam Cation efflux family 67 310 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Amo13g0462 387 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 387 - -
Amo13g0462 387 TIGRFAM CDF: cation diffusion facilitator family transporter 61 387 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Amo13g0462 387 MobiDBLite consensus disorder prediction 194 216 - -
Amo13g0462 387 MobiDBLite consensus disorder prediction 194 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0462 Amo-Chr13 6064494 6066709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0462 1 387 Inorganic Solute Cotransporters AT2G29410 48.062 5.45e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0462 K14689 - gmx:100777590 499.975