Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0411 ATGGCTAAGACACTCATCTCCTCTCCCTCCTTCATCGGAACTCCACTCCCCTCCCTCTATCGCCACCGCTTCCCCCACCGCCCTGCCAGACTCAAAGTCAACTTCAGCCTCCACCAGATTCCACCAATCCACTCCCTCACCCACTCTTTCCACTTCGACGAAGTCGTCGCCAGAGCCGAAGGCCTTCTCTACACGCTCGCCGACGCTGCTGTCGCTACCGCCGACTCTGCTGCCACCGCCACCGGGACTTCCACCGATGCCGCCGCCGACACCGTGCAGAAGAACGGAGGCTGGTTCGGATTCATCTCCGAAGCCATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTCTTTCTGCTGTGCATGTACCTTATGCATATGGATTTGCTATCATATTGCTCACAGTTGTGGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATAGACAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACATTGGCTACAATTCCAGTATGGATTGGTCTTTACCAAGCTTTATCAAATGTTGCAAATGAGGGATTGTTAACAGAAGGTTTCTTTTGGATCCCATCTCTTGGAGGTCCTACTACCATAGCTGCTAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTCCCTTTTGTGGATGGTCATCCACCATTGGGTTGGCAGGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTTGTTTCTCAATACGTCTCCATGGAAGTCATGAAGCCACCTCAGACGAATGATCCTACCCAAAAGAATACACTTCTTATTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCTCTCTCTGTTCCATCCGGGCTAACAATTTACTGGTTTACAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAACCTGTTGTAGATGAAAATGCTGGTGGAATTATCACAGCAGGACGTGCTAAAAGATCAGCTTCCCAGCCAGCTAAAGCTGGTGAAAGATTTAGGCAGTTAAAAGAAGAGGACAAAAAGAAAAAGTCAAGCAAGGCACTACCAGTGGAAGAAGTTCAACCTTTGGCATCTACTACTGATTCTGATGATGGCTCAGATGAAGAGAGTAACAAGGGATCAGAAGCTGCACAAGAAGAAGCATATGCTTCTACAGTTGGCAAAGATTCTAGGGAAAGAAGAAGCAAGCGCTCGAAACGGAAGCGGGCTGTATAA 1344 0.4658 MAKTLISSPSFIGTPLPSLYRHRFPHRPARLKVNFSLHQIPPIHSLTHSFHFDEVVARAEGLLYTLADAAVATADSAATATGTSTDAAADTVQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVVVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEVMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPVVDENAGGIITAGRAKRSASQPAKAGERFRQLKEEDKKKKSSKALPVEEVQPLASTTDSDDGSDEESNKGSEAAQEEAYASTVGKDSRERRSKRSKRKRAV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0411 447 MobiDBLite consensus disorder prediction 367 391 - -
Amo13g0411 447 MobiDBLite consensus disorder prediction 359 447 - -
Amo13g0411 447 Pfam 60Kd inner membrane protein 126 340 IPR001708 GO:0016021|GO:0032977
Amo13g0411 447 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 440 - -
Amo13g0411 447 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 126 339 IPR028055 -
Amo13g0411 447 PANTHER OXA1 1 440 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0411 Amo-Chr13 5469281 5475146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0411 33 396 Chloroplast and Mitochondria Gene Families AT2G28800 71.429 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0411 K03217 - gmx:100817173 669.848