Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0391 ATGGTGCTGCAGAAGAGGTTAGACTATGGATTTAATGGCTACGAAGCACCAGCTGTTCCACGCGCTACCCGAACAACTAGAAGGAGAACCAAATTTCAAAGAAGAGTCCAAGATGATCAAATGTGCGCCATTGATTTATTGGCCACCCTAGCAGGTAAATTCTTTTTCCAAGATAAAGGGAATCCAACCATGCCTAGTGATGCATCAACAGATAAGGATCAGCATGGATTTGTTGAAGGGTGCCAAGATTCAGACAAACCTCTCAAAGATGAGCTTTTTTACAAACAAAGTTTTGACAACAACCACTTCCCTCACTTTTCTTCACAAACAAACAAACAAAATTGTCCATTGAATGAACTCCAAAATCACGAAATTGATGTCCATTTAGGCAATGCTTCTGTAATAATAAGTTCCTGTAGCTCAGAAAGGCTAGTTTCTGAGAAATTAGTGGATGCCAGATGCCCTAACAAAATGGAAAATTTTACTAGCAAAGACATATTAGGTTCTTCTGGTCATCCAGTGGTTAATTGTTGTAAATTAGATGGTGAAAGTAAAACTAATAAACTAAAGGATAAGCTGCATAAGCTTGAGAAGGTTTCAATTGATCTTGGGACTAAGATGTGTGGTTTTGAGGATCCACCAACTGAAAAGCCTCCTACACGGATCAGTTTAGGTAGCAAAGCCAAGTTGTCTAAGTATGTTGACATATTTTCCTATAGCTCATTGCCCAAAGGCTGTGACAATGTGTCAGCAGTTAGAAGAGATGATGACGAAAACTTTTCTGGGTCTACTCACCCTTGTACAAAAACGAAGTCCTTTATGCCAGTGACTGGTATACATGGTAGAAGACTAAGGAAATTATTGAGTTGTAAATACAGCAAAATTGCTCAGGAGTTGAAGAATGATACACTTGCTAGCAGTGATGAAACTTTGAAGCCAACTTACTCTAGTAAGAAGAACTACTATAAACGCCAAAGATCTCAGATGAATATTCCTTTCAAAAAGCGGAAGCAGTTTCATTGTAGCTCTGTTTCAAATTCCAGTGGATTTATAAGAAGTGCTGACATTTATTATTCACCTGAGAGTGACTGTGGAATACCAGTCTTGGAATCCCCACTAGGATGTAGAAGAGGTGATCCTGTGAATATTAGGATCAAGTCATTTACAGTCCCAGAGCTTTTTATTGAGATTCCAGAAACTGCTACCGTAGGATCCTTGAAGAGGACAGTTATGGATGCAGTAACTACTGTGCTTGGAGGTGGATTACACGTTGGTGTCGTACTTCAAGGAAAGAAAGTTAGAGATGACAGTAAAACTCTACTTCAAGCTGGAATATCCCATGATAACCAGTTGGATGCTTTGGGTTTCACATTGGAGCCTAATGTTTCACAAAGCCTACCACCTCTACATGCTTCAACATCACATTCTCTAATAAGGTATCCTTCCAATCCAGCTGTAACTCATCAGAGGACTCGAGGTATTTCTGACATGTTAATTGATCATCAAGTAACCAGTTTAGGTAACCATGTTGAAAGTGAGCATGATTCAGCACCTTCTCTAATCAACAAAGCTAAGGAGAAGAGTACCGTAGATTCTAAACAACTGGTTTCTTTTCCTGAAATGAGTAAGGATGAAAAAGTTATGATACCTGTGGTCCAGAAGTCAAAGCGATCTGAGATTTTGCAGCGGCGAATTCGTCGGCCTTTTTCAGTTGATGAAGTGGAAGCACTGATTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGCGATGTTAAATGTCATGCTTTCGGTAACGTGGACCATCGGACATATGTGGATTTAAAGGATAAATGGAAAACACTGGTGCACACGGCAGGAATATCCCCTCGGCAAAGAAGGGGAGAGCCTGTTCCCCAAGATCTTTTGGACAGGGTCCTAAAAGCACAAGCATATTGGTCCCAGCACCAAACTAAGCAACATCACAAAACTAACCTCTTAGATCAAGGGTTGCCAATAGGACCTGGCTATGTACATGGGATAACTGCATAG 2031 0.4057 MVLQKRLDYGFNGYEAPAVPRATRTTRRRTKFQRRVQDDQMCAIDLLATLAGKFFFQDKGNPTMPSDASTDKDQHGFVEGCQDSDKPLKDELFYKQSFDNNHFPHFSSQTNKQNCPLNELQNHEIDVHLGNASVIISSCSSERLVSEKLVDARCPNKMENFTSKDILGSSGHPVVNCCKLDGESKTNKLKDKLHKLEKVSIDLGTKMCGFEDPPTEKPPTRISLGSKAKLSKYVDIFSYSSLPKGCDNVSAVRRDDDENFSGSTHPCTKTKSFMPVTGIHGRRLRKLLSCKYSKIAQELKNDTLASSDETLKPTYSSKKNYYKRQRSQMNIPFKKRKQFHCSSVSNSSGFIRSADIYYSPESDCGIPVLESPLGCRRGDPVNIRIKSFTVPELFIEIPETATVGSLKRTVMDAVTTVLGGGLHVGVVLQGKKVRDDSKTLLQAGISHDNQLDALGFTLEPNVSQSLPPLHASTSHSLIRYPSNPAVTHQRTRGISDMLIDHQVTSLGNHVESEHDSAPSLINKAKEKSTVDSKQLVSFPEMSKDEKVMIPVVQKSKRSEILQRRIRRPFSVDEVEALIQAVEKLGTGRWRDVKCHAFGNVDHRTYVDLKDKWKTLVHTAGISPRQRRGEPVPQDLLDRVLKAQAYWSQHQTKQHHKTNLLDQGLPIGPGYVHGITA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0391 676 Gene3D - 554 658 - -
Amo13g0391 676 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 657 IPR031105 -
Amo13g0391 676 SUPERFAMILY Ubiquitin-like 378 466 IPR029071 -
Amo13g0391 676 ProSiteProfiles Myb-like domain profile. 561 616 IPR001005 -
Amo13g0391 676 SUPERFAMILY Homeodomain-like 567 648 IPR009057 -
Amo13g0391 676 SMART sant 565 618 IPR001005 -
Amo13g0391 676 CDD SANT_TRF 567 617 - -
Amo13g0391 676 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 561 620 IPR017930 -
Amo13g0391 676 Pfam Myb-like DNA-binding domain 566 615 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0391 Amo-Chr13 5253754 5258314 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo13g0391 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0391 - - gmx:100797436 708.368