Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0390 ATGACTTTTGGGTTGGTGTACACAGTTTATGCAACTGAAGTGGACCCAAAGAAAGGTAACATTGGACTAATTGCACCAATTGCAATTGGCTTCATTGTTGGTGCAAACATCTTGGCTGGTGGTGCCTTTGATGGAATTGCTGCACATGTCTCTGAGCTTTTCTTCATCAACCAAAACACTCATGAGCAGCTTCCAACCACAGATTATTGA 210 0.4238 MTFGLVYTVYATEVDPKKGNIGLIAPIAIGFIVGANILAGGAFDGIAAHVSELFFINQNTHEQLPTTDY* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0390 69 Pfam Major intrinsic protein 1 47 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo13g0390 69 SUPERFAMILY Aquaporin-like 1 47 IPR023271 -
Amo13g0390 69 Gene3D Glycerol uptake facilitator protein. 1 57 IPR023271 -
Amo13g0390 69 PANTHER AQUAPORIN-8 1 46 IPR034294 -
Amo13g0390 69 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0390 Amo-Chr13 5239832 5240126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0390 1 69 Major Intrinsic Protein MIP AT2G36830 53.922 9.31e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0390 K09873 - csin:114278064 107.457