Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0380 GGAATAAGAAATTGTGGTGAATTTTGGTCGAGATTGAAGGTGTACGAGCTGAGGAACAAAACGAAAGCAGAGCTTCTGAGCCAATTGAAGGATCTGAAAGCTGAGCTGGCACTCCTCCGTGTTGCCAAGGTCACTGGCGGAGCACCCAACAAGCTCTCCAAAATAAAATTGGTGCGGTTATCGATAGCGCAGGTGTTGACGGTTATTTCGCAGAAGCAAAAGTCGGTGCTGAGGGAAGCTTACAAGAAGAAGAAGAAGTATCTGCCTTTGGATCTGCGTCCTAAGAAGACCAGAGCTATCAGAAGACGCCTCACCAAGCACCGGGCTTCTTTGAAGACGGAGCGTGAGAAGAAGAAGGAAGTATACTTCCCATTGAGAAAATATGCAATCTCGTATGATCACCTCATGGATGGTCTTCAAAGGCAGAAGAACCTAAGAAGACCTTGTCAATGA 453 0.4658 GIRNCGEFWSRLKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKLVRLSIAQVLTVISQKQKSVLREAYKKKKKYLPLDLRPKKTRAIRRRLTKHRASLKTEREKKKEVYFPLRKYAISYDHLMDGLQRQKNLRRPCQ* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0380 150 CDD Ribosomal_L29_HIP 16 72 - -
Amo13g0380 150 Gene3D - 10 85 IPR036049 GO:0003735|GO:0005840|GO:0006412
Amo13g0380 150 PANTHER 60S RIBOSOMAL PROTEIN L35 10 130 IPR045059 GO:0000463|GO:0022625
Amo13g0380 150 Pfam Ribosomal L29 protein 16 72 IPR001854 GO:0003735|GO:0005840|GO:0006412
Amo13g0380 150 TIGRFAM L29: ribosomal protein uL29 16 72 IPR001854 GO:0003735|GO:0005840|GO:0006412
Amo13g0380 150 Hamap 50S ribosomal protein L29 [rpmC]. 12 72 IPR001854 GO:0003735|GO:0005840|GO:0006412
Amo13g0380 150 Gene3D - 87 131 - -
Amo13g0380 150 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 10 130 - -
Amo13g0380 150 Coils Coil 15 42 - -
Amo13g0380 150 SUPERFAMILY Ribosomal protein L29 (L29p) 12 73 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0380 Amo-Chr13 5174849 5178093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0380 9 130 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 83.607 6.69e-65 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0380 13 5174849 5178093 Amo13g0380 13 5174849 5178093 ECH