Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0379 ATGCCGAGAAAAGGAATGAGAAGTATCTTCTTCAAACCTTCACCTTCTCATCATCCGCCACGTCACTACTCACTACCACCACCCTCCCCTCTTCGCACCTTCTCCGACACCCTTATGGACGATAACATCCATACGGCGGAGTCACTTATAACCAAGTGGGATTATAATAATAACAATAATAACTCCGTCAGTTCACGCCTTTCAAACTCTAGCTCACTCTTCAGCGGAACACGCCTGGATGCCAAACACTACGTTGACGCCGTCAAGGGCCTACAGGCCGCTATGAAGTACCTCGTCGCACAGGATCCCTCCTCTGCTTATCTCCTTCGAGCACAGTCTCTCATGCAAATCGCAATGAAAACTCTTGAGAGAGAGTTTCACCAGATCTTAAAGGTCAATAGGGAATACCTCGATCCCGAAACCGTTTCTAACCGCTCCGAAACCGTTTCTAACCGTTCGTCAACGGATTTCGGCCAGAACAGTTTCTCTGATATCGATGAGATTGTTTCCGACGACGAGTTTCGACTTGCCGGAGAAGGAGTCGCTGATGCCGAGAGAGCTTCCATGCTTGCCGTCAACGATTTGAAGGGAATCGCGGATTGCATGATTTCCACTGGCTACGGAAGAGAGTGCGTTAGGATTTACGTGTTGGTGAGGAAATCGATCGTTGATGAAGCTCTTTACAATCTTGGAGTGGAGCAGTTGAGCTTCTCGCGTCTCCAGAAGATGGATTGGGAGGTGGTTGAGTTGAAGATCAAGCACTGGCTGAACGCGATGAAGGTTGCCGTCGGAACTCTCTTCAACGGTGAGAGGATACTCTGCGATAGTGTCTTCGCTACCACCGCGCCGGAGAAACGGATCGCGGAGTCTTCCTTCGCTGAGATCACTAGAGACGGCGCCATGATGCTGTTTGGATTCCCGGAAATGGTTGCAAAGTGCAAGAAAACGCCGGAGAAGATGTTCAGGACTCTCGATATGTACGAAGCGATCTCGGAAAACTGGCCGCAGATCGAATCCATCTTCTCCTTCGAATCAACCGCCAGAGTCCGTACGCAGGCGGTTACTTCCTTGGTGAAGCTTGGCGACGCCGTGAGGACGATGCTATCGGAATTTGAATCGGCGATTCAGAAGGAACCGTGCAAGACGACGATTCCCGGCGGTGGAGTACACCCAATCACGGGCTATGTGTTGAACTACATCTCTCTCCTAGCCGATTATAGCGGCGTCCTCGTTGACATAATCGCCGATTATCCACAGTCTCCGTTGCCGGAATCTTTCTACCGAAGCCCGATCCACGAGGATAGCACGTCGTCGTCCTTCTCCACGGTACCGTCGCCGGCAATCTCAGAGAGAATCGCATGGCTGATCCTCGTGGTTCTCTGCAAGCTCGACGTGAAAGCGGAGCGCTACAAGGACGTGGCGCTTTCTTACCTATTCCTCGCTAACAACATGCATTACGTAGTAGAAAAGGTTCGAAAATCGAACCTAGGGTTGCTCCTCGGTGAAGAGTGGATGGCGAAGCACGAAGCGAAGACGAAGGAATACATAGCCAAATACGAGCGCGTCGGGTGGAACAGCGTGCTCACTTCGCTGCCGGAGAATCCCGCGGCGGAGATCTCAGCGGAGCAAGCTAAGGCTTGCTTCGTTAGCTTCAACACAGCGTTTCACGAAGCCTGCAAGAAACAAAGCGGGTGGGTTGTACCCGACCCGAAACTGAGAGACGAAATCAAAGTGTCGATAGCTTTGAAGCTGGTTTCCAAGTACGGCGAGTTCTACGATAAGAATAGGGTCGGGTCTGATTCGGCAATACGGTTCTTACCCGACGATATTGGAAACCAATTGTCAGATATTTTGTACGGCATTGGAGAATCGAGTAGTGGCTCGTCGCATGCTTTGACGACGTCGTCTTCACGTCGCTCCAACGGAAGCAGAAGGTGA 1938 0.5129 MPRKGMRSIFFKPSPSHHPPRHYSLPPPSPLRTFSDTLMDDNIHTAESLITKWDYNNNNNNSVSSRLSNSSSLFSGTRLDAKHYVDAVKGLQAAMKYLVAQDPSSAYLLRAQSLMQIAMKTLEREFHQILKVNREYLDPETVSNRSETVSNRSSTDFGQNSFSDIDEIVSDDEFRLAGEGVADAERASMLAVNDLKGIADCMISTGYGRECVRIYVLVRKSIVDEALYNLGVEQLSFSRLQKMDWEVVELKIKHWLNAMKVAVGTLFNGERILCDSVFATTAPEKRIAESSFAEITRDGAMMLFGFPEMVAKCKKTPEKMFRTLDMYEAISENWPQIESIFSFESTARVRTQAVTSLVKLGDAVRTMLSEFESAIQKEPCKTTIPGGGVHPITGYVLNYISLLADYSGVLVDIIADYPQSPLPESFYRSPIHEDSTSSSFSTVPSPAISERIAWLILVVLCKLDVKAERYKDVALSYLFLANNMHYVVEKVRKSNLGLLLGEEWMAKHEAKTKEYIAKYERVGWNSVLTSLPENPAAEISAEQAKACFVSFNTAFHEACKKQSGWVVPDPKLRDEIKVSIALKLVSKYGEFYDKNRVGSDSAIRFLPDDIGNQLSDILYGIGESSSGSSHALTTSSSRRSNGSRR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0379 645 Gene3D Exocyst complex component Exo70 64 625 - -
Amo13g0379 645 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 25 624 - -
Amo13g0379 645 Pfam Exo70 exocyst complex subunit 253 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo13g0379 645 SUPERFAMILY Cullin repeat-like 78 617 IPR016159 -
Amo13g0379 645 MobiDBLite consensus disorder prediction 624 645 - -
Amo13g0379 645 MobiDBLite consensus disorder prediction 1 23 - -
Amo13g0379 645 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 624 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0379 Amo-Chr13 5164572 5166779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0379 7 620 EXO70 exocyst subunit family AT5G59730 49.282 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0379 K07195 - gmx:100808078 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0379 13 5164572 5166779 Amo13g0379 13 5164572 5166779 ECH