Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0357 ATGCAAATGGAAAAGGAAAACCAAAACGGCGATATCGCACTTGATTCCAAATACGTTCGCTACAACATTCTTGGAAACTTGTTCGACGTTTATGCTCACTACGTTCCTCCCATTCAACCCGTTGGTCGTGGCGCTTACGGCGTCGTTTGCTGCGCGACGAATTCGGAGACCAAAGAAGGTGTTGCCATCAAGAAGATCGGGAATGCCTTTGACAACCGGATCGATGCCAAGAGGACTCTCCGGGAAATCAAGCTCCTCTGTCACATGGACCATGATAATGTGATTAAGATAAAGGATATAATAAGGCCAGCGGAGAGGGAAAAGTTCAATGATGTGTACATAGTTTATGAGCTGATGGACACTGATCTCCATCAGATTATTCAGTCTAACCAGCCTCTCACTGATGATCACTGCCAGTATTTCTTATACCAGCTCTTGAGAGGATTAAAGTATGTACACTCTGCCAATGTTTTGCACCGAGATCTAAAGCCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACATCTGAGACAGATTTTATGACAGAATATGTTGTCACTCGTTGGTACAGAGCCCCTGAATTGCTATTGAACTGTTCAGAATATACTGCAGCTATTGATATCTGGTCTGTTGGATGTATTTTGATGGAAATAATTAGAAGGGAACCTTTGTTTCCTGGTAAGGATTATGTTCAGCAGTTGGCACTTATAACTGAGTTACTAGGTTCACCAGATGAATCGGATCTTGGATTTCTCAGAAGTGAGAATGCAAAGAAATATGTTAAGCAGCTCCCACATGTAGAAAAGCAGCCATTTGCGCTGAGGTTTCCTGATGTGTCTCCATTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTTGATCCCTCAAAACGCATAACTGTTGAGGAAGCACTGAATCACCCATATTTGGCAAGCCTTCATGAGATCAATGAGGAGCCCACTTGCCCGAGTCCATTCATCTTTGATTTTGAACAGACAAGTCTGAATGAAGAAGATATAAAGGAGCTCATATGGCAAGAGTCTCTGAACTTCAGCCAGGATCAGATGCTTGAATAA 1110 0.4234 MQMEKENQNGDIALDSKYVRYNILGNLFDVYAHYVPPIQPVGRGAYGVVCCATNSETKEGVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIIRPAEREKFNDVYIVYELMDTDLHQIIQSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPDESDLGFLRSENAKKYVKQLPHVEKQPFALRFPDVSPLAIDLAEKMLVFDPSKRITVEEALNHPYLASLHEINEEPTCPSPFIFDFEQTSLNEEDIKELIWQESLNFSQDQMLE* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0357 369 ProSiteProfiles Protein kinase domain profile. 35 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0357 369 SMART serkin_6 35 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0357 369 Gene3D Phosphorylase Kinase; domain 1 18 358 - -
Amo13g0357 369 CDD STKc_TEY_MAPK 28 363 - -
Amo13g0357 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 13 367 - -
Amo13g0357 369 Pfam Protein kinase domain 39 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0357 369 ProSitePatterns MAP kinase signature. 70 173 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo13g0357 369 ProSitePatterns Protein kinases ATP-binding region signature. 41 65 IPR017441 GO:0005524
Amo13g0357 369 SUPERFAMILY Protein kinase-like (PK-like) 38 327 IPR011009 -
Amo13g0357 369 Gene3D Transferase(Phosphotransferase) domain 1 119 348 - -
Amo13g0357 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 367 - -
Amo13g0357 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0357 Amo-Chr13 4836164 4838980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0357 3 362 MAP Kinase Gene Family AT1G07880 79.167 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo13g0357 Pkinase 2.9e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0357 13 4836164 4838980 Amo13g0357 13 4836164 4838980 ECH